Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	24293	24316	24	2 [1]	[1] 2	r1tp41/r1tp42	ORF41/ORF42

TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTATGATATTTCAAACTTC  >  NC_004302/24310‑24391        |                                                                           tggtggTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTATGatatcta         <  1:4541609/75‑4 (MQ=255)        aCGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTATGATATTTCAAAcaat  <  1:5459029/75‑4 (MQ=255)        |                                                                           TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTATGATATTTCAAACTTC  >  NC_004302/24310‑24391

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑