Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	5273	6189	917	2 [0]	[1] 2	[r1tp09]–[r1tp10]	[r1tp09],[r1tp10]

GATGAACGCAGACGGAAAGCAGGATTTGAACGACTTGACTTAGCAGTAAATGAAGCTAATGTAGTTTATGGGCTT  >  NC_004302/5204‑5278                                                                     |       gatgaACGCAGACGGAAAGCAGGATTTGAAGCAGTTGACTTAGCAGTAAATGAAGCTAATGTAGTTTAttacggt  <  1:1403633/75‑7 (MQ=255) gatgaACGCAGACGGAAAGCAGGATTTGAAGCAGTTGACTTAGCAGTAAATGAAGCTAATGTAGTTTAttacggt  <  1:9445970/75‑7 (MQ=255)                                                                     |       GATGAACGCAGACGGAAAGCAGGATTTGAACGACTTGACTTAGCAGTAAATGAAGCTAATGTAGTTTATGGGCTT  >  NC_004302/5204‑5278

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑