Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_004302 4499 8498 4000 2 [1] [1] 2 [r1tp07]–[r1tp12] [r1tp07],r1tp08,r1tp09,r1tp10,r1tp11,[r1tp12]

TTTTGAAAATATTAAAGATAAGCGTGTTAGTCAGTTGCCATTCTAGGAGAAGCAATGAAAACAATAATCATTGAGCAGTGGGA  >  NC_004302/8484‑8566
               |                                                                   
tgtagtaaaTATTAAAGATAAGCGTGTTAGTCAGTTGCCATTCTAGGAGAAGCAATGAAAACAATAATCATTGAg          >  1:5544181/7‑75 (MQ=255)
        catgcttaGATAAGCGTGTTAGTCAGTTGCCATTCTAGGAGAAGCAATGAAAACAATAATCATTGAGCAGTGGGa  >  1:5519111/8‑75 (MQ=255)
               |                                                                   
TTTTGAAAATATTAAAGATAAGCGTGTTAGTCAGTTGCCATTCTAGGAGAAGCAATGAAAACAATAATCATTGAGCAGTGGGA  >  NC_004302/8484‑8566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑