Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	24588	25078	491	3 [1]	[1] 2	r1tp42	ORF42

ATTACAACTGGTATTACTACAATGATGGGTATTATAGGACCATCAATAGATACTTTAGTAAATTCATTCGTAAAAATGTGGAATTCA  >  NC_004302/25064‑25150                |                                                                        atcagaaCTGGTATTACTACAATGATGGGTATTATAGGACCATCAATAGATACTTTAGTAAATTCATTCGTaaaa              >  1:4915119/6‑75 (MQ=255)             tagactacAATGATGGGTATTATAGGACCATCAATAGATACTTTAGTAAATTCATTCGTAAAAATGTGGaattca  >  1:397556/4‑75 (MQ=255)                |                                                                        ATTACAACTGGTATTACTACAATGATGGGTATTATAGGACCATCAATAGATACTTTAGTAAATTCATTCGTAAAAATGTGGAATTCA  >  NC_004302/25064‑25150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑