Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	23307	23461	155	2 [1]	[1] 2	r1tp40	ORF40

GAATTAAGACGTAGACAATACCGTGCTAAGTATGAATTGATATCTGAATAGATGTTGACTTTAATGTATTTGTATGATAAAATGAATATATAGATACGTGGTA  >  NC_004302/23434‑23536                             |                                                                           gAATTAAGACGTAGACAATACCGTGCTAAGTATGAATTGATATCTGCATAGATGTTGACTTTAATGTAtttcgag                              <  1:5422096/75‑5 (MQ=255)                             aGTATGAATTGATATCTGCATAGATGTTGACTTTAATGTATTTGTATGATAAAATGAATATATAGGTActgagtg  <  1:5173928/75‑7 (MQ=255)                             |                                                                           GAATTAAGACGTAGACAATACCGTGCTAAGTATGAATTGATATCTGAATAGATGTTGACTTTAATGTATTTGTATGATAAAATGAATATATAGATACGTGGTA  >  NC_004302/23434‑23536

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑