Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	19850	19882	33	2 [1]	[1] 2	r1tp31	Structural protein

TACATTCGTGCTGAATTATTCCTTGGTTGGGGTATCCTTGATGCTACTAAATTTGCTCGGGTAACTGAAGCTAATTAATAAGGA  >  NC_004302/19867‑19950                 |                                                                    tcatatCGTGCTGAATTATTCCTTGGTTGGGGTATCCTTGATGCTACTAAATTTGCTCGGGTAACTGAAGCtaat           >  1:4806662/6‑75 (MQ=255)          ttaggaatattCCTTGGTTGGGGTATCCTTGATGCTACTAAATTTGCTCGGGTAACTGAAGCTAATTAATAagga  >  1:5636977/8‑75 (MQ=255)                 |                                                                    TACATTCGTGCTGAATTATTCCTTGGTTGGGGTATCCTTGATGCTACTAAATTTGCTCGGGTAACTGAAGCTAATTAATAAGGA  >  NC_004302/19867‑19950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑