Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	30374	30424	51	2 [1]	[1] 2	r1tp47	ORF47

AGCAAATTTAGCTGATATGACGAGCTTACAAAGTGCAATGACAGAGCTCAAAAAAGAAGTAGAAGCATTTGGTATTAGTCCTGAAAAT  >  NC_004302/30302‑30389                                                                        |                 aGCAAATTTAGCTGATATGACGAGCTTACAAAGTGCAATGACAGAGCTCAAAAAAGAAGTAGAAGCATTTggaat               <  1:7235849/75‑4 (MQ=255)              gATATGACGAGCTTACAAAGTGCAATGACAGAGCTCAAAAAAGAAGTAGAAGCATTTGGTATTAGTccgattttc  <  1:6042678/75‑8 (MQ=255)                                                                        |                 AGCAAATTTAGCTGATATGACGAGCTTACAAAGTGCAATGACAGAGCTCAAAAAAGAAGTAGAAGCATTTGGTATTAGTCCTGAAAAT  >  NC_004302/30302‑30389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑