Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	25608	25674	67	2 [1]	[1] 2	r1tp42	ORF42

CTGGTGGAGCATTAAGAAGTATGATATCAGGAGCTTGGAGTGGTATTCGCTCCATCATCTCATCTGTAGGTGGTTCTA  >  NC_004302/25536‑25613                                                                        |       tgggtgaAGCATTAAGAAGTATGATATCAGGAGCTTGGAGTGGTATTCGCTCCATCATCTCATCTGGAggtgaga     >  1:1819903/3‑72 (MQ=255)    aaagaaaaTTATGAAGTATGATATCAGGAGCTTGGAGTGGTATTCGCTCCATCATCTCATCTGTAGGTGGTTCTa  >  1:5843044/8‑75 (MQ=255)                                                                        |       CTGGTGGAGCATTAAGAAGTATGATATCAGGAGCTTGGAGTGGTATTCGCTCCATCATCTCATCTGTAGGTGGTTCTA  >  NC_004302/25536‑25613

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑