| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,661,649 | 2 bp→GA | intergenic (‑188/‑132) | SAUSA300_RS13665 ← / → SAUSA300_RS13670 | haloacid dehalogenase/peptide ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,661,649 | 0 | A | G | 100.0% | 20.8 / NA | 10 | intergenic (‑188/‑133) | SAUSA300_RS13665/SAUSA300_RS13670 | haloacid dehalogenase/peptide ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (7/3); total (7/3) | |||||||||||
| * | NC_007793 | 2,661,650 | 0 | C | A | 100.0% | 24.6 / NA | 10 | intergenic (‑189/‑132) | SAUSA300_RS13665/SAUSA300_RS13670 | haloacid dehalogenase/peptide ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (7/3); total (7/3) | |||||||||||
GAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAA > NC_007793/2661561‑2661739 || gAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATAACGATATATTTATc < 1:3827754/100‑1 (MQ=255) ttCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATAACGATATATTTATCATTTAGACa < 1:5254097/100‑1 (MQ=255) gCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATAACGATATATTTATCATTTAGACAAAATATAgt > 1:2911330/1‑100 (MQ=255) aaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATAACGATATATTTATCATTTAGACAAAATATAGTGTGa > 1:667937/1‑100 (MQ=255) tACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATAACGATATATTTATCATTTAGACAAAATATAGTGTGATATACTa > 1:2605205/1‑100 (MQ=255) tacTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATAACGATATATTTATCATTTAGACAAAATATAGTGTGATATACTAAt > 1:168488/2‑100 (MQ=255) acctaGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATAACGATATATTTATCATTTAGACAAAATCTAGTGTGATATACTAATTTATaa > 1:1884208/4‑100 (MQ=255) aGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATAACGATATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATc > 1:3602875/1‑100 (MQ=255) gctCAGAATATTGTAAAAATATAACGATATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAAttt > 1:1085428/3‑100 (MQ=255) aaaTATAACGATATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTaa < 1:5090177/100‑1 (MQ=255) || GAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAA > NC_007793/2661561‑2661739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |