| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,152,543 | 2 bp→GT | intergenic (‑36/+112) | SAUSA300_RS10965 ← / ← SAUSA300_RS10970 | sucrose‑6‑phosphate hydrolase/LacI family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,152,543 | 0 | A | G | 100.0% | 13.7 / NA | 7 | intergenic (‑36/+113) | SAUSA300_RS10965/SAUSA300_RS10970 | sucrose‑6‑phosphate hydrolase/LacI family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (3/4); total (3/4) | |||||||||||
| * | NC_007793 | 2,152,544 | 0 | A | T | 100.0% | 14.6 / NA | 7 | intergenic (‑37/+112) | SAUSA300_RS10965/SAUSA300_RS10970 | sucrose‑6‑phosphate hydrolase/LacI family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (3/4); total (3/4) | |||||||||||
ACCCAGTCCTCCTTTTATAATTTATGCTAATAACAATTTATATTCTATTATAGCAAATTTTACCTACGTTCTTTAACTTTTAACCTATCCATTTATAGTTATATGGTATCGGTT > NC_007793/2152515‑2152628 || gcccAGTCCTCCTTTTATAATTTATGCTGTTAACAATTTATATTCTATTATAGCAAATTTTACCTACGTTCTTTAACTTTTAACCTATCCATTTATAGtt > 1:2432113/2‑100 (MQ=255) cAGTCCTCCTTTTATAATTTATGCTGTTAACAATTTATATTCTATTATAGCAAATTTTACCTACGTTCTTTAACTTTTAACCTATCCATTTATAGTtata > 1:1250134/1‑100 (MQ=255) tctctcctTTTATAATTTATGCTGTTAACAATTTATATTCTATTATAGCAAATTTTACCTACGTTCTTTAACTTTTAACCTATCCATTTATAGTTATATg < 1:1948813/97‑1 (MQ=255) gTCCTCCTTTTATAATTTATGCTGTTAACAATTTATATTCTATTATAGCAAATTTTACCTACGTTCTTTAACTTTTAACCTATCCATTTATAGTTATATg < 1:5542236/100‑1 (MQ=255) cctcctTTTATAATTTATGCTGTTAACAATTTATATTCTATTATAGCAAATTTTACCTACGTTCTTTAACTTTTAACCTATCCATTTATAGTTATATGGt < 1:4851728/100‑1 (MQ=255) cctTTTATAATTTATGCTGTTAACAATTTATATTCTATTATAGCAAATTTTACCTACGTTCTTTAACTTTTAACCTATCCATTTATAGTTaaatagatcg > 1:4551573/1‑94 (MQ=255) ttATAATTTATGCTGTTAACAATTTATATTCTATTATAGCAAATTTTACCTACGTTCTTTAACTTTTAACCTATCCATTTATAGTTATATGGTATCGGtt < 1:355953/100‑1 (MQ=255) || ACCCAGTCCTCCTTTTATAATTTATGCTAATAACAATTTATATTCTATTATAGCAAATTTTACCTACGTTCTTTAACTTTTAACCTATCCATTTATAGTTATATGGTATCGGTT > NC_007793/2152515‑2152628 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |