| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 60,890 | 2 bp→GA | coding (318‑319/360 nt) | SAUSA300_RS00265 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 60,890 | 0 | A | G | 100.0% | 15.5 / NA | 8 | L107L (TTG→CTG) | SAUSA300_RS00265 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (1/7); total (1/7) | |||||||||||
| * | NC_007793 | 60,891 | 0 | G | A | 100.0% | 18.5 / NA | 8 | I106I (ATC→ATT) | SAUSA300_RS00265 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (1/7); total (1/7) | |||||||||||
AATAAGTTGATATATAAGTGACTTATTTTTTTAATAGAATTTTAATTCCTCTGTTAATGTTCAAGATATATAATATTAAAGCAATTAAAAAGAATATAATAGTAATAATTAAAAGAATGCTAAATATTAATAATTGATGATCCAAAGGTTTA > NC_007793/60827‑60978 || aataaGTTGATATATAAGTCACTTATTTTTTTAATAAAATTTTAATTCCTCTGATAATGTTGAGAATATATAATATTAAAGCAATTAAAAAGAatacagt < 1:458287/100‑5 (MQ=255) aaGTTGATATATAAGTCACTTATTTTTTTAATAAAATTTTAATTCCTCTGATAATGTTGAGAATATATAATATTAAAGCAATTAAAAAGAATacaaagca < 1:4726706/100‑5 (MQ=255) gTTGATATATAAGTCACTTATTTTTTTAATAAAATTTTAATTCCTCTGATAATGTTGAGAATATATAATATTAAAGCAATTAAAAAGAATACAATAgcag < 1:1984075/100‑4 (MQ=255) ttAATTCCTCTGATAATGTTGAGAATATATAATATTAAAGCAATTAAAAAGAATACAATAGCAATGATTAAAGCAATAACAAATATTAATAATTgatgat < 1:2166268/100‑1 (MQ=255) tctCCTCTGATAATGTTGAGAATATATAATATTAAAGCAATTAAAAAGAATACAATAGCAATGATTAAAGCAATAACAAATATTAATAATTGATGATcaa < 1:4345723/98‑3 (MQ=255) ccgatctGATAACGTTGAGAATATATAATATTAAAGCAATTAAAAAGAATACAATAGCAATGATTAAAGCAATAACAAATATTAATAATTGATGATcaag < 1:4480747/96‑4 (MQ=255) ctGATAATGTTGAGAATATATAATATTAAGGCAATTAAAAAGAATACAATAGCAATGATTAAAGCAATAACAAATATTAATAATTGATGATCAAACGGtt < 1:1037166/100‑1 (MQ=255) gatAATGTTGAGAATATATAATATTAAAGCAATTAAAAAGAATACAATAGCAATGATTAAAGCAATAACAAATATTAATAATTGATGATCAAACGGttag > 1:5250923/3‑98 (MQ=255) || AATAAGTTGATATATAAGTGACTTATTTTTTTAATAGAATTTTAATTCCTCTGTTAATGTTCAAGATATATAATATTAAAGCAATTAAAAAGAATATAATAGTAATAATTAAAAGAATGCTAAATATTAATAATTGATGATCCAAAGGTTTA > NC_007793/60827‑60978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |