| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,113,934 | 2 bp→AC | coding (53‑54/369 nt) | SAUSA300_RS10720 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,113,934 | 0 | G | A | 100.0% | 19.8 / NA | 9 | T18T (ACC→ACT) | SAUSA300_RS10720 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (4/5); total (4/5) | |||||||||||
| * | NC_007793 | 2,113,935 | 0 | G | C | 100.0% | 18.7 / NA | 9 | T18S (ACC→AGC) | SAUSA300_RS10720 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (4/5); total (4/5) | |||||||||||
GTCCATTGCTTCATGTAGTTCCCAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAGATTTGGTAAACCTATATGGTTTATCATTTATTGTTACAATCCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTAT > NC_007793/2113838‑2114020 || gTCCATTGCTTCATGTAGTTCCCAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAGATTTggga < 1:2221487/100‑3 (MQ=255) gCTTCATGTAGTTCCCAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCtat < 1:5340115/100‑1 (MQ=255) cTTCATGTAGTTCCCAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCtata < 1:699296/100‑1 (MQ=255) gcAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGttt > 1:2263270/2‑100 (MQ=255) ccAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGttt > 1:3545569/1‑100 (MQ=255) ccAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCAttt > 1:1125436/1‑100 (MQ=255) cGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATc < 1:5185148/100‑1 (MQ=255) ttATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATCCag < 1:5341060/100‑2 (MQ=255) gACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATCCACCTCTTatat > 1:265102/1‑100 (MQ=255) ccATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTAt < 1:261346/100‑1 (MQ=255) || GTCCATTGCTTCATGTAGTTCCCAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAGATTTGGTAAACCTATATGGTTTATCATTTATTGTTACAATCCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTAT > NC_007793/2113838‑2114020 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |