| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,103,375 | 2 bp→TT | coding (296‑297/405 nt) | SAUSA300_RS10615 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,103,375 | 0 | C | T | 100.0% | 16.7 / NA | 8 | G99G (GGG→GGA) | SAUSA300_RS10615 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (1/7); total (1/7) | |||||||||||
| * | NC_007793 | 2,103,376 | 0 | C | T | 100.0% | 18.7 / NA | 8 | G99E (GGG→GAG) | SAUSA300_RS10615 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (1/7); total (1/7) | |||||||||||
TAGCGTCTCAAAATACTTATTTTGCCCTTGTCTTATTGCTCTATTAACGCCACCCATAGCTTTAGGTTTGATAAATTTACCTGTCCCTTTTTGAACGTGTCCATTTTCAATTAAATGTACGATTTTATAACGGTCTTTAGAACCTCGCCAATGAACAGTAAT > NC_007793/2103291‑2103452 || tAGCGTCTCAAAATACTTATTTTGCCCTTGTCTTATTGCTCTATTAACACCGCCCATAGCTTTAGGTTTGATAAATTTACCTGTTTCTTTTTGAACgtgt < 1:4861090/100‑1 (MQ=255) aTACTTATTTTGCCCTTGTCTTATTGCTCTATTAACACCGCCCATAGCTTTAGGGTTGATACATTTACCTGTTTCTTTTTGAACGTGTCCATATTCAAtt > 1:3938082/1‑100 (MQ=255) ctccgcccATAGCTTTAGGTTTGATAAATTTACCTGTTTCTTTTTGAACGTGTCCATATTCAATTAAATGTACGATTTTATAACGGTCTTTAGAACCTCg < 1:2733959/95‑1 (MQ=255) cgcccATAGCTTTAGGTTTGATAAATTTACCTGTTTCTTTTTGAACGTGTCCATATTCAATTAAATGTACGATTTTATAACGGTCTTTAGAACCTCGCCa < 1:5418430/98‑1 (MQ=255) cccATAGCTTTAGGTTTGATAAATTTACCTGTTTCTTTTTGAACGTGTCCATATTCAATTAAATGTACGATTTTATAACGGTCTTTAGAACCTCGCCaca < 1:2533971/100‑3 (MQ=255) cccATAGCTTTAGGTTTGATAAATTTACCCGTTTCTTTTTGAACGTGTCCATATTCAATTAAATGTACGATTTTATAACGGTCTTTAGACCCTCGCCAAt < 1:4572083/100‑1 (MQ=255) ctgtAGCTTTAGGTTTGATAAATTTACCTGTTTCTTTTTGAACGTGTCCATATTCAATTAAATGTACGATTTTATAACGGTCTTTAGAACCTCGCCAATg < 1:4936052/97‑1 (MQ=255) tAGGTTTGATAAATTTACCTGTTTCTTTTTGAACGTGTCCATATTCAATTAAATGTACGATTTTATAACGGTCTTTAGAACCTCGCCAATGAACAGAAAt < 1:1961223/100‑1 (MQ=255) || TAGCGTCTCAAAATACTTATTTTGCCCTTGTCTTATTGCTCTATTAACGCCACCCATAGCTTTAGGTTTGATAAATTTACCTGTCCCTTTTTGAACGTGTCCATTTTCAATTAAATGTACGATTTTATAACGGTCTTTAGAACCTCGCCAATGAACAGTAAT > NC_007793/2103291‑2103452 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |