Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 2,103,043 2 bp→GT coding (227‑228/405 nt) SAUSA300_RS10610 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077932,103,0430AG100.0% 13.6 / NA 7F76F (TTT→TTC) SAUSA300_RS10610hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (3/4);  total (3/4)
*NC_0077932,103,0440AT100.0% 13.9 / NA 7F76Y (TTT→TAT) SAUSA300_RS10610hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (3/4);  total (3/4)

CAGACCATAATAACTTTTGAATACGATTAGATATCTTATTTCTTATGATTCTCGCGTTATACTTTTCGTTAAACTTCACAAATACATCTATTTGTACAATGTAACTATATGCGCGCTCATCTCCGTCAGT  >  NC_007793/2102973‑2103102
                                                                      ||                                                          
gagACCATAATAACTTTTGAATACGATTAGATATCTTATTTCTTATGATTCTCGCATTATATTCATCATTGTACTTAACAAAAACATCTATTTGGACaag                                >  1:2328938/2‑99 (MQ=255)
cagACCATAATAACTTTTGAATACGATTAGATATCTTATTTCTTATGATTCTCGCATTATATTCATCATTGTACTTAACAAAAACATCTATTTGGACata                                >  1:506176/1‑98 (MQ=255)
  gACCATAATAACTTTTGAATACGATTAGATATCTTATTTCTTATGATTCTCGCATTATATTCATCATTGTACTTAACAAAAACATCTATTTGGACaagta                              <  1:339695/100‑4 (MQ=255)
                           tAGATATCTTATTTCTTATGATTCTCGCATTATATTCATCATTGTACTTAACAAAAACATCTATTTGGACAATATAACTATATGCACACTCATCTCCGTc     <  1:1432958/100‑1 (MQ=255)
                           tAGATATCTTATTTCTTATGATTCTCGCATTATATTCATCATTGTACTTAACAAAAACATCTATTTGGACAATATAACTATATGCACACTCATCTCCGTc     <  1:2892304/100‑1 (MQ=255)
                            aGATATCTTATTTCTTATGATTCTCGCATTATATTCATCATTGTACTTAACAAAAACATCTATTTGGACAATATAACTATATGCACACTCATCTCCGTCa    >  1:3666809/1‑100 (MQ=255)
                              atatCTTATTTCTTATGATTCTCGCATTATATTCATCATTGTACTTAACAAAAACATCTATTTGGACAATATAACTATATGCACACTCATCTCCGTCAGt  <  1:5186951/100‑1 (MQ=255)
                                                                      ||                                                          
CAGACCATAATAACTTTTGAATACGATTAGATATCTTATTTCTTATGATTCTCGCGTTATACTTTTCGTTAAACTTCACAAATACATCTATTTGTACAATGTAACTATATGCGCGCTCATCTCCGTCAGT  >  NC_007793/2102973‑2103102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑