| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,102,775 | 2 bp→AT | coding (87‑88/645 nt) | SAUSA300_RS10605 ← | phage tail protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,102,775 | 0 | G | A | 100.0% | 21.2 / NA | 9 | L30L (CTA→TTA) | SAUSA300_RS10605 | phage tail protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (2/7); total (2/7) | |||||||||||
| * | NC_007793 | 2,102,776 | 0 | C | T | 100.0% | 21.6 / NA | 9 | K29K (AAG→AAA) | SAUSA300_RS10605 | phage tail protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (2/7); total (2/7) | |||||||||||
CAGCATATGCTGTTTTCAAGTCTCCTCCAGTTTCAACACCGATTTTTTGTAATCCTCTAGTTTTTGTAATATCGCTATATTCTAGCTTTGCGCCTTCTTTTGTTAATTTAGCGAAACCTAAACCAGTAATGTTAAAATACGCTTTCGGCGCACTTGCTTG > NC_007793/2102691‑2102850 || cAGCATAAGCTGTTTTTAGTTCTCCACCAGTTTCAACACCAATTTTTTGTAATCCTCTTGTTTTTGTAATATCACTATATTTTAATTCCGCGCcttcttg < 1:3157439/100‑2 (MQ=255) cTGTTTTTAGTTCTCCACCAGTTTCAACACCAATTTTTTGTAATCCTCTTGTTTTTGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAAttt < 1:381980/100‑1 (MQ=255) ccaccAGTTTCAACACC‑AATTTTTGTAATCCTCTTGTTTTTGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAATTTAGCGAAACCTAAAcc > 1:1066555/4‑100 (MQ=255) cAACACCAATTTTTTGTAATCCTCTTGTTTTTGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAATTTAGCGAAACCTAAACCAGTAATGtt < 1:995073/100‑1 (MQ=255) aTCCTCTTGTTTTTGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAATTTAGCGAAACCTAAACCAGTAATGTTAATATACGCCTTTggggt < 1:3814337/100‑4 (MQ=255) gTTTTTGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAATTTAGCGAAACCTAAACCAGTAATGTTAATATACGCCTTTGGCGCActtgcat < 1:177684/100‑3 (MQ=255) gTTTTTGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAATTTAGCGAAACCTAAACCAGTAATGTTAATATACGCCTTTGGCGCActtgcat < 1:1919053/100‑3 (MQ=255) gTTTTTGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAATTTAGCGAAACCTAAACCAGTAATGTTAATATACGCCTTTGGCGCActtgcat > 1:2659914/1‑98 (MQ=255) tttttGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAATTTAGCGAAACCTAAACCAGTAATGTTAATATACGCCTTTGGCGCActtgcatt < 1:152576/100‑4 (MQ=255) || CAGCATATGCTGTTTTCAAGTCTCCTCCAGTTTCAACACCGATTTTTTGTAATCCTCTAGTTTTTGTAATATCGCTATATTCTAGCTTTGCGCCTTCTTTTGTTAATTTAGCGAAACCTAAACCAGTAATGTTAAAATACGCTTTCGGCGCACTTGCTTG > NC_007793/2102691‑2102850 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |