| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,102,709 | 2 bp→GT | coding (153‑154/645 nt) | SAUSA300_RS10605 ← | phage tail protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,102,709 | 0 | A | G | 100.0% | 22.1 / NA | 10 | L52L (TTG→CTG) | SAUSA300_RS10605 | phage tail protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (3/7); total (3/7) | |||||||||||
| * | NC_007793 | 2,102,710 | 0 | G | T | 100.0% | 23.8 / NA | 10 | D51E (GAC→GAA) | SAUSA300_RS10605 | phage tail protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (3/7); total (3/7) | |||||||||||
GGAAAGCATGCATTTGTAACGAAATTTTACCTTCTCCGTCTGTGTTCCCTGATTCGATTGGACCACCATCAGCATATGCTGTTTTCAAGTCTCCTCCAGTTTCAACACCGATTTTTTGTAATCCTCTAGTTTTTGTAATATCGCTATATTCTAGCTTTGCGCCTTCTTTTGTTAATTT > NC_007793/2102622‑2102799 || ggAACGCATGCATTTGTAATGAGATTTTACCTTCTCCGTCTGTATTCCCTGATTCAATTGGACCGCCATCAGCATAAGCTGTTTTTAGTTCTCCACCAGt < 1:5123135/100‑1 (MQ=255) aacgcatgcatTTGTAATGAGATTTTACCTTCTCCGTCTGTATTCCCTGATTCAATTGGACCGCCATCAGCATAAGCTGTTTTTAGTTCTCCACCAGttt > 1:5474265/4‑100 (MQ=255) acgcatgcatTTGTAATGAGATTTTACCTTCTCCGTCTGTATTCCCTGATTCAATTGGACCGCCATCAGCATAAGCTGTTTTTAGTTCTCCACCAGTTTc < 1:1374912/98‑1 (MQ=255) acgcatgcatTTGTAATGAGATTTTACCTTCTCCGTCTGTATTCCCTGATTCAATTGGACCGCCATCAGCATAAGCTGTTTTTAGTTCTCCACCAGTTTc < 1:3387196/98‑1 (MQ=255) acgcatgcatTTGTAATGAGATTTTACCTTCTCCGTCTGTATTCCCTGATTCAATTGGACCGCCATCAGCATAAGCTGTTTTTAGTTCTCCACCAGTTTc < 1:4093226/98‑1 (MQ=255) gagaTTTTACCTTCTCCGTCTGTATTCCCTGATTCAATTGGACCGCCATCAGCATAAGCTGTTTTTAGTTCTCCACCAGTTTCAACACCAATTTTTTGTa < 1:3116224/97‑1 (MQ=255) tacgcctGGACCGCCATCAGCATAAGCTGTTTTTAGTTCTCCACCAGTTTCAACACCAATTTTTTGTAATCCTCTTGTTTTTGTAATATCACTATAtttt > 1:2913169/7‑98 (MQ=255) caccgccATCAGCATAAGCTGTTTTTAGTTCTCCACCAGTTTCAACACCAATTTTTTGTAATCCTCTTGTTTTTGTAATATCACTATATTTTaattccgc > 1:4605520/2‑93 (MQ=255) cAGCATAAGCTGTTTTTAGTTCTCCACCAGTTTCAACACCAATTTTTTGTAATCCTCTTGTTTTTGTAATATCACTATATTTTAATTCCGCGCcttcttg < 1:3157439/100‑2 (MQ=255) cTGTTTTTAGTTCTCCACCAGTTTCAACACCAATTTTTTGTAATCCTCTTGTTTTTGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAAttt < 1:381980/100‑1 (MQ=255) || GGAAAGCATGCATTTGTAACGAAATTTTACCTTCTCCGTCTGTGTTCCCTGATTCGATTGGACCACCATCAGCATATGCTGTTTTCAAGTCTCCTCCAGTTTCAACACCGATTTTTTGTAATCCTCTAGTTTTTGTAATATCGCTATATTCTAGCTTTGCGCCTTCTTTTGTTAATTT > NC_007793/2102622‑2102799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |