| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,102,310 | 2 bp→CG | coding (552‑553/645 nt) | SAUSA300_RS10605 ← | phage tail protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,102,310 | 0 | T | C | 100.0% | 18.4 / NA | 9 | N185D (AAT→GAT) | SAUSA300_RS10605 | phage tail protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (0/9); total (0/9) | |||||||||||
| * | NC_007793 | 2,102,311 | 0 | T | G | 100.0% | 17.9 / NA | 9 | G184G (GGA→GGC) | SAUSA300_RS10605 | phage tail protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (0/9); total (0/9) | |||||||||||
CGTTATCCTCTGTCACGTTTCCAGTATATTCTTCGCCTAAAATTTTCTTTAAGAAAGCCTCTTCGCCTTTTTCACCATTTCCACTATGATTTGTCATGTTTGCTGAATCAAAGATATATTTACGTACTGACTTTTTATTATCAATTAAAGGGAAAAGTGCCTCACCTT > NC_007793/2102232‑2102399 || cGTTATCCTCTGTCACGTTTCCAGTATATTCTTCGCCTAAAATTTTCTTTAAGAAAGCCTCTTCGCCTTTTTCACCGTCGCCACCATGATTTGTCATGtt < 1:4789895/100‑1 (MQ=255)cGTTATCCTCTGTCACGTTTCCAGTATATTCTTCGCCTAAAATTTTCTTTAAGAAAGCCTCTTCGCCTTTTTCACCGTCGCCACCATGACTTGTCATGtt < 1:2989253/100‑1 (MQ=255) ctGTCACGTTTCCAGTATATTCTTCGCCTAAAATTTTCTTTAAGAAAGCCTCTTCGCCTTTTTCACCGTCGCCACCATGATTTATCATGTTAGCTGagaa < 1:5554798/100‑4 (MQ=255) gTCACGTTTCCAGTATATTCTTCGCCTAAAATTTTCTTTAAGAAAGCCTCTTCGCCTTTTTCACCGTCGCCACCATGATTTGTCATGTTAGCTGAGTCaa < 1:4899966/100‑1 (MQ=255) atatTCTTCGCCTAAAATTTTCTTTAAGAAAGCCTCTTCGCCTTTTTCACCGTCGCCACCATGATTTGTCATGTTAGCTGAGTCAAAGATATATTTACGt < 1:3349678/100‑1 (MQ=255) atTCTTCGCCTAAAATTTTCTTTAAGAAAGCCTCTTCGCCTTTTTCACCGTCGCCACCATGATTTGTCATGTTAGCTGAGTCAAAGATATATTTACGTAc < 1:3342447/100‑1 (MQ=255) ttAAGAAAGCCTCTTCGCCTTTTTCACCGTCGCCACCATGATTTGTCATGTTAGCTGAGTCAAAGATATATTTACGTACAGACTTTTTATTATCAACTaa < 1:5032831/100‑1 (MQ=255) gCCTTTTTCACCGTCGCCACCATGATTTGTCATGTTAGCTGAGTCAAAGATATATTTACGTACAGACTTTTTATTATCAACTAAAGGGAAAAGTggcacg < 1:1559580/100‑6 (MQ=255) atttCACCGTCGCCACCATGATTTGTCATGTTAGCTGAGTCAAAGATATATTTACGTACAGACTTTTTATTATCAACTAAAGGGAAAAGTGCCTCACCtt < 1:4592519/99‑1 (MQ=255) || CGTTATCCTCTGTCACGTTTCCAGTATATTCTTCGCCTAAAATTTTCTTTAAGAAAGCCTCTTCGCCTTTTTCACCATTTCCACTATGATTTGTCATGTTTGCTGAATCAAAGATATATTTACGTACTGACTTTTTATTATCAATTAAAGGGAAAAGTGCCTCACCTT > NC_007793/2102232‑2102399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |