Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,101,614	2 bp→TT	coding (288‑289/351 nt)	SAUSA300_RS10600 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,101,614	0	C	T	100.0%	11.0 / NA	6	V97I (GTT→ATT)	SAUSA300_RS10600	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (1/5);  total (1/5)
*	NC_007793	2,101,615	0	C	T	100.0%	11.0 / NA	6	V96V (GTG→GTA)	SAUSA300_RS10600	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (1/5);  total (1/5)

TTTATTTCATGTTCTGGATAAAATTTCTAGTTTCCTCAGTTTGTTGACCTTGCGTAATGAAAACCACTTGTTCACGAAGTGCATTCATTCCATCAGGTGCATGCATACGTTCTTTTAGGTCTTTAACTGCG  >  NC_007793/2101551‑2101681                                                                ||                                                                   tttATTTCATGTTCTGGATAAAATTTCTAGTTTCCTCAGTTTGCTGACCTTGAGTAATGAAAATTACTTGTTCACGAAGTGCATTCATTCCATCAGGtgc                                 <  1:548800/100‑1 (MQ=255)  ttATTTCATGTTCTGGATAAAATTTCTAGTTTCCTCAGTTTGCTGACCTTGAGTAATGAAAATTACTTGTTCACGAAGTGCATTCATTCCATCAGGtgct                                <  1:4706451/100‑2 (MQ=255)   tATTTCATGTTCTGGATAAAATTTCTAGTTTCCTCAGTTTGCTGACCTTGAGTAATGAAAATTACTTGTTCACGAAGTGCATTCATTCCATCAGGtgcat                               <  1:473056/100‑1 (MQ=255)         aTGTTCTGGATAAAATTTCTAGTTTCCTCAGTTTGCTGACCTTGAGTAATGAAAATTACTTGTTCACGAAGTGCATTCATTCCATCAGGTGCATGCATag                         <  1:3473876/100‑2 (MQ=255)                   tAAAATTTCTAGTTTCCTCAGTTTGCTGACCTTGAGTAATGAAAATTACTTGTTCACGAAGTGCATTCATTCCATCAGGTGCGTGCATACGTTCTTTTaa               >  1:1613782/1‑99 (MQ=255)                                ttCCTCAGTTTGCTGACCTTGAGTAATGAAAATTACTTGTTCACGAAGTGCATTCATTCCATCAGGTGCATGCATACGTTCTTTTAAGTCTTTAACTgtg  <  1:1407585/100‑3 (MQ=255)                                                                ||                                                                   TTTATTTCATGTTCTGGATAAAATTTCTAGTTTCCTCAGTTTGTTGACCTTGCGTAATGAAAACCACTTGTTCACGAAGTGCATTCATTCCATCAGGTGCATGCATACGTTCTTTTAGGTCTTTAACTGCG  >  NC_007793/2101551‑2101681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑