| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,635,072 | 2 bp→CA | coding (891‑892/1848 nt) | SAUSA300_RS08085 ← | membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,635,072 | 0 | G | C | 100.0% | 14.5 / NA | 7 | L298V (CTT→GTT) | SAUSA300_RS08085 | membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (0/7); total (0/7) | |||||||||||
| * | NC_007793 | 1,635,073 | 0 | T | A | 100.0% | 15.4 / NA | 7 | T297T (ACA→ACT) | SAUSA300_RS08085 | membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (0/7); total (0/7) | |||||||||||
CTAAAAATAAGAATAAAAATAAAGCAAATGTAGAAAAAATCAACTTCGCAAAACTTATTGATAAAAATACTATCGACATAAAAAGTGTAATAATAAAACCAATCACTGAAATAGCCAACTTTTGAAATACATAACCTTGCGTCATATATTTATTATTTTTCTTTTCAACCTCATC > NC_007793/1634988‑1635162 || cTAAAAATAAGAATAAAAATAAAGCAAATGTAGAAAAAATCAACTTCGCAAAACTAATTGATAAAAATACAATTGACATAAAAACAGTAATAATAAAGcc < 1:86496/100‑1 (MQ=255) aaaaTAAGAATAAAAATAAAGCAAATGTAGAAAAAATCAACTTCGCAAAACTAATTGATAAAAATACAATTGACATAAAAACAGTAATAATAAAGCCAAt < 1:2339021/100‑1 (MQ=255) aataaaGCAAATGTAGAAAAAATCAACTTCGCAAAACTAATTGATAAAAATACAATTGACATAAAAACAGTAATAATAAAGCCAATAACTGAAATAGCCa < 1:3025697/100‑1 (MQ=255) cAACTTCGCAAAACTAATTGATAAAAATACAATTGACATAAAAACAGTAATAATAAAGCCAATAACTGAAATAGCCAACTTTTGAAATACATAACCTTgg < 1:815782/100‑2 (MQ=255) gCAAAACTAATTGATAAAAATACAATTGACATAAAAACAGTAATAATAAAGCCAATAACTGAAATAGCCAACTTTTGAAATACATAACCTTGCGTCatat < 1:4923214/100‑1 (MQ=255) ttgACATAAAAACAGTAATAATAAAGCCAATAACTGAAATAGCCAACTTTTGAAATACATAACCTTGCGTCATATATTTATTACCTTTTTTCTCAACCTc < 1:1092395/98‑1 (MQ=255) aCATAAAAACAGTAATAATAAAGCCAATAACTGAAATAGCCAACTTTTGAAATACATAACCTTGCGTCATATATTTATTATCTTTTTTCTCAACCTCAtt < 1:2252035/100‑2 (MQ=255) || CTAAAAATAAGAATAAAAATAAAGCAAATGTAGAAAAAATCAACTTCGCAAAACTTATTGATAAAAATACTATCGACATAAAAAGTGTAATAATAAAACCAATCACTGAAATAGCCAACTTTTGAAATACATAACCTTGCGTCATATATTTATTATTTTTCTTTTCAACCTCATC > NC_007793/1634988‑1635162 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |