| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,579,527 | 2 bp→TG | coding (299‑300/537 nt) | SAUSA300_RS07730 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,579,527 | 0 | A | T | 100.0% | 23.8 / NA | 10 | S100R (AGT→AGA) | SAUSA300_RS07730 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (7/3); total (7/3) | |||||||||||
| * | NC_007793 | 1,579,528 | 0 | C | G | 100.0% | 22.8 / NA | 10 | S100T (AGT→ACT) | SAUSA300_RS07730 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (7/3); total (7/3) | |||||||||||
TATCTGTGGTGTGCTAACAACTGCGTCTTGAGCAAATTCTTTATCTTTAAAATTAAACATGTTGTGAAATTCACTATTTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCTGATGACACTCCTACTTGATTCGCAATACTCA > NC_007793/1579455‑1579600 || tatCTGTGGTGTACTAACAACTGCGCCTTGAGCAAATTCTTTATCTTTAAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGct < 1:2706254/100‑1 (MQ=255) tgtgGTGTACTAACAACTGCGCCTTGAGCAAATTCTTTATCTTTAAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGcttctt > 1:2658032/1‑100 (MQ=255) gtggtgTACTAACAACTGCGCCTTGAGCAAATTCTTTATCTTTAAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCttt > 1:919418/1‑100 (MQ=255) aacaacTGCGCCTTGAGCAAATTCTTTATCTTTAAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCTTTTATCtcttct > 1:1479624/1‑100 (MQ=255) aacaacTGCGCCTTGAGCAAATTCTTTATCTTTAAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCTTTTATCtcttct > 1:409353/1‑100 (MQ=255) cttGCGCCTTGAGCAAATTCTTTATCTTTAAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCtgatg > 1:140410/3‑100 (MQ=255) aGCAAATTCTTTATCTTTAAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCTGATGACACTCCTACt < 1:474830/100‑1 (MQ=255) aaaTTCTTTATCTTTAAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCTGATGACACTCCTACttac < 1:4304356/100‑3 (MQ=255) tatctttaAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCTGATGACACTCCTACTTGATTCGCAAt > 1:4160256/1‑100 (MQ=255) ttaAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCTGATGACACTCCTACTTGATTCGCAATACTCa > 1:5081596/1‑100 (MQ=255) || TATCTGTGGTGTGCTAACAACTGCGTCTTGAGCAAATTCTTTATCTTTAAAATTAAACATGTTGTGAAATTCACTATTTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCTGATGACACTCCTACTTGATTCGCAATACTCA > NC_007793/1579455‑1579600 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |