| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 46,393 | 2 bp→AC | coding (1127‑1128/1629 nt) | SAUSA300_RS00200 ← | recombinase RecB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 46,393 | 0 | G | A | 100.0% | 58.2 / NA | 21 | H376H (CAC→CAT) | SAUSA300_RS00200 | recombinase RecB |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (1/20); total (1/20) | |||||||||||
| * | NC_007793 | 46,394 | 0 | T | C | 100.0% | 51.4 / NA | 21 | H376R (CAC→CGC) | SAUSA300_RS00200 | recombinase RecB |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (1/20); total (1/20) | |||||||||||
TTATTTTGATTTGTACTTCATCATATTGTTGTTGCTTATAAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTGATTTTCTTGATTGACGTGTGTTACTACGCGTTGAATGACTTTATCACTTTTGACTATTTCAAGTATTTGCTTCATCACATAATCTTCAATCACATCAGCTCTTACACT > NC_007793/46302‑46485 || ttagttTGGTTTGTACTTCATCATATTGTTGTTGCTTATAAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTTATTTTCTTGATTAACACGTGCtac < 1:963282/100‑1 (MQ=255)ttagttTGGTTTGTACTTCATCATATTGTTGTTGCTTATAAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTTATTTTCTTGATTAACACGTGCtac < 1:215338/100‑1 (MQ=255) gtttGTACTTCATCATATTGTTGTTGCTTATAAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTTATTTTCTTGATTAACACGTGCTACAACGCGtt < 1:1758007/99‑1 (MQ=255) tttGTACTTCATCATATTGTTGTTGCTTATAAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTTATTTTCTTGATTAACACGTGCTACAACGCGTTg < 1:5337903/100‑1 (MQ=255) tttGTACTTCATCATATTGTTGTTGCTTATAAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTTATTTTCTTGATTAACACGTGCTACAACGCGTTg < 1:2318032/100‑1 (MQ=255) ttGTACTTCATCATATTGTTGTTGCTTATAAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTTATTTTCTTGATTAACACGTGCTACAACGCGTTgg < 1:4885458/100‑2 (MQ=255) ttGTACTTCATCATATTGTTGTTGCTTATAAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTTATTTTCTTGATTAACACGTGCTACAACGCGTTGa < 1:1280373/100‑1 (MQ=255) tACTTCATCATATTGTTGTTGCTTATAAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTTATTTTCTTGATTAACACGTGCTACAACGCGTTGAATg < 1:63052/100‑1 (MQ=255) cTTCATCATATTGTTGTTGCTTATAAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTTATTTTCTTGATTAACACGTGATACAACGCGTTGAATgca < 1:5226855/100‑3 (MQ=255) ttCATCATATTGTTGTTGCTTATAAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTTATTTTCTTGATTAACACGTGCTACAACGCGTTGAATggtg < 1:3457821/100‑4 (MQ=255) tcatcaTATTGTTGTTGCTTATAAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTTATTTTCTTGATTAACACGTGCTACAACGCGTTGAATGaggt < 1:1265480/100‑4 (MQ=255) tgttgttgCTTATAAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTTATTTTCTTGATTAACACGTGCTACAACGCGTTGAATGACTTTATCACtta < 1:1492886/100‑2 (MQ=255) ttgCTTATAAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTTATTTTCTTGATTAACACGTGCTACAACGCGTTGAATGACTTTATCACTTTTGACt < 1:208586/100‑1 (MQ=255) tataAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTTATTTTCTTGATTAACACGTGCTACAACGCGTTGAATGACTTTATCACTTTTGACTATTTc > 1:961419/1‑100 (MQ=255) gaAGTGCAGCGCCATCAACTTTATTTTCTTGATTAACACGTGCTACAACGCGTTGAATGACTTTATCACTTTTGACTATTTCGAGTATTTGCTTCATtac < 1:5461095/100‑1 (MQ=255) cAACTTTATTTTCTTGATTAACACGTGCTACAACGCGTTGAATGACTTTATCACTTTTGACTATTTCGAGTATTTGCTTCATTACATAATCTTCAATcac < 1:4176767/100‑1 (MQ=255) aCTTTATTTTCTTGATTAACACGTGCTACAACGCGTTGAATGACTTTATCACTTTTGACTATTTCGAGTATTTGCTTCATTACATAATCTTCAATcacca < 1:210142/100‑3 (MQ=255) cTTTATTTTCTTGATTAACACGTGCTACAACGCGTTGAATGACTTTATCACTTTTGACTATTTCGAGTATTTGCTTCATTACATAATCTTCAATCACATc < 1:3453916/100‑1 (MQ=255) cTTTATTTTCTTGATTAACACGTGCTACAACGCGTTGAATGACTTTATCACTTTTGACTATTTCGAGTATTTGCTTCATTACATAATCTTCAATCACATc < 1:3692448/100‑1 (MQ=255) cTTTATTCTCTTGATTAACACGTGCTACAACGCGTTGAATGACTTTATCACTTTTGACTATTTCGAGTATTTGCTTCATTACATAATCTTCAATCACATc < 1:5059780/100‑1 (MQ=255) gattgaCACGTGCTACAACGCGTTGAATGACTTTATCACTTTTGACTATTTCGAGTATTTGCTTCATTACATAATCTTCAATCACATCAGCTCTTacaca < 1:5671130/100‑2 (MQ=255) || TTATTTTGATTTGTACTTCATCATATTGTTGTTGCTTATAAGCAATATCGTGATGAAGTGCAGCGCCATCAACTTGATTTTCTTGATTGACGTGTGTTACTACGCGTTGAATGACTTTATCACTTTTGACTATTTCAAGTATTTGCTTCATCACATAATCTTCAATCACATCAGCTCTTACACT > NC_007793/46302‑46485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |