| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,708,564 | T→G | A15A (GCA→GCC) | SAUSA300_RS13900 ← | CHAP domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,708,564 | 0 | T | G | 100.0% | 52.8 / NA | 21 | A15A (GCA→GCC) | SAUSA300_RS13900 | CHAP domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (5/16); total (5/16) | |||||||||||
TGTATACGTATAGCTGTATGATTGAGCGTCATTAGAATTATATCCATTGTTATTTTGTTCTGCGGCTTGTGCATCATGTCCTGCAAATGCGATAGTTGCAAGTCCTGCTGTAGCGATTGTAGCTGTAACGATTTTTTTCATAATTAAATATCCTCCCAATAATCAAAACACTCTATACATATAGTCATTAGCG > NC_007793/2708468‑2708660 | tGTATACGTATAGCTGTATGATTGAGCGCCATTAGAATTATATCCGTTGTTATTTTGTTCTGCGGCTTGTGCATCATGTCCTGCAAATGCGATAGTGGCa < 1:1555398/100‑1 (MQ=255) ataCGTATAGCTGTATGATTGAGCGTCATTAGAATTATATCCATTGTTATTTTGTTCTGCGGCTTGTGCATCATGTCCTGCAAATGCGATAGTGGCAAGt < 1:4270841/100‑1 (MQ=255) ctataGCTGTATGATTGAGCGTCATTAGAATTATATCCATTGTTATTTTGTTCTGCGGCTTGTGCATCATGTCCTGCAAATGCGATAGTGGCAAGTCctg > 1:1268277/2‑100 (MQ=255) ataGCTGTATGATTGAGCGTCATTAGAATTATATCCATTGTTATTTTGTTCTGCGGCTTGTGCATCATGTCCTGCAAATGCGATAGTGGCAAGTCctgct > 1:4193745/1‑100 (MQ=255) ataGCTGTATGATTGAGCGTCATTAGAATTATATCCATTGTTATTTTGTTCTGCGGCTTGTGCATCATGTCCTGCAAATGCGATAGTGGCAAGTCctgct < 1:3830673/100‑1 (MQ=255) aGCTGTATGATTGAGCGTCATTAGAATTATATCCATTGTTATTTTGTTCTGCGGCTTGTGCATCATGTCCTGCAAATGCGATAGTGGCAAGTCCTGCTGt < 1:1288229/100‑1 (MQ=255) aGCTGTATGATTGAGCGTCATTAGAATTATATCCATTGTTATTTTGTTCTGCGGCTTGTGCATCATGTCCTGCAAATGCGATAGTGGCAAGTCCTGCTGt < 1:5375765/100‑1 (MQ=255) aGCTGTATGATTGAGCGTCATTAGAATTATATCCATTGTTATTTTGTTCTGCGGCTTGTGCATCATGTCCTGCAAATGCGATAGTGGCAAGTCCTGCTGt < 1:2693031/100‑1 (MQ=255) aGCTGTATGATTGAGCGTCATTAGAATTATATCCATTGTTATTTTGTTCTGCGGCTTGTGCATCATGTCCTGCAAATGCGATAGTGGCAAGTCCTGCTGt < 1:3118224/100‑1 (MQ=255) cTGTATGATTGAGCGTCATTAGAATTATATCCATTGTTATTTTGTTCTGCGGCTTGTGCATCATGTCCTGCAAATGCGATAGTGGCAAGTCCTGCTGTAg < 1:1212328/100‑1 (MQ=255) cttccgatcTTGTGCGTCATGTCCTGCAAATGCGATAGTGGCAAGTCCTGCTGTAGCGATTGTAGCTGTAACGATTTTTTTCATAATTAAATATCCTccc < 1:2775676/92‑1 (MQ=255) gCGGCTTGTGCATCATGTCCTGCAAATGCGATAGTGGCAAGTCCTGCTGTAGCGATTGTAGCTGTAACGATTTTTTTCATAATTAAATATCCTCCCaata < 1:902468/100‑1 (MQ=255) gCGGCTTGTGCATCATGTCCTGCAAATGCGATAGTGGCAAGTCCTGCTGTAGCGATTGTAGCTGTAACGATTTTTTTCATAATTAAATATCCTCCCaata > 1:2039630/1‑100 (MQ=255) gCTTGTGCATCATGTCCTGCAAATGCGATAGTGGCAAGTCCTGCTGTAGCGATTGTAGCTGTAACGATTTTTTTCATAATTAAATATCCTCCCAATAATc < 1:706707/100‑1 (MQ=255) gCTTGTGCATCATGTCCTGCAAATGCGATAGTGGCAAGTCCTGCTGTAGCGATTGTAGCTGTAACGATTTTTTTCATAATTAAATATCCTCCCAATAATc < 1:1198651/100‑1 (MQ=255) catGTCCTGCAAATGCGATAGTGGCAAGTCCTGCTGTAGCGATTGTAGCTGTAACGATTTTTTTCATAATTAAATATCCTCCCAATAATCAAAACActca > 1:5148764/1‑99 (MQ=255) tCCTGCAAATGCGATAGTGGCAAGTCCTGCTGTAGCGATTGTAGCTGTAACGATTTTTTTCATAATTAAATATCCTCCCAATAATCAAAACACTCTATAc < 1:325775/100‑1 (MQ=255) ccTGCAAATGCGATAGTGGCAAGTCCTGCTGTAGCGATTGTAGCTGTAACGATTTTTTTCATAATTAAATATCCTCCCAATAATCAAAACACTCTATGCa > 1:5159833/1‑100 (MQ=255) aaaTGCGATAGTGGCAAGTCCTGCTGTAGCGATTGTAGCTGTAACGATTTTTTTCATAATTAAATATCCTCCCAATAATCAAAACACTCTATACatatca < 1:670105/100‑3 (MQ=255) cGATAGTGGCAAGTCCTGCTGTAGCGATTGTAGCTGTAACGATTTTTTTCATAATTAAATATCCTCCCAATAATCAAAACACTCTATACATATAGTCAtt < 1:4131493/100‑1 (MQ=255) aGTGGCAAGTCCTGCTGTAGCGATTGTAGCTGTAACGATTTTTTTCATAATTAAATATCCTCCCAATAATCAAAACACTCTATACATATAGTCATTAGCg < 1:3456713/100‑1 (MQ=255) | TGTATACGTATAGCTGTATGATTGAGCGTCATTAGAATTATATCCATTGTTATTTTGTTCTGCGGCTTGTGCATCATGTCCTGCAAATGCGATAGTTGCAAGTCCTGCTGTAGCGATTGTAGCTGTAACGATTTTTTTCATAATTAAATATCCTCCCAATAATCAAAACACTCTATACATATAGTCATTAGCG > NC_007793/2708468‑2708660 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |