D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,616,847	T→C	I280V (ATT→GTT)	SAUSA300_RS13465 ←	helicase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,616,847	0	T	C	92.3%	230.4 / 6.6	104	I280V (ATT→GTT)	SAUSA300_RS13465	helicase
Reads supporting (aligned to +/- strand): ref base T (0/8); new base C (1/95); total (1/103)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.49e-02

Only 100 of 117 total aligned reads displayed.

TCTCTATGTTTTCCTGTCAACAATCCAAAATCACTATCATTTTTTATAGGTAATACTTTTTTAAATTCTTCCTTAGCTCTATTTAAAATCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAGAT  >  NC_007793/2616759‑2616941

 tcttccgatctCCTGTCAACAATCCAAAATCACTATCATTTTTTATAGGTAATACTTTTTTAAATTCTTCCTTAGCTCTATTTAAAACCCCCTCATTATg                                                                                    <  1:4082961/90‑1 (MQ=255)

    tATGTCTTCCTGTCAACAATCCAAAATCACTATCATTTTTTATAGGTAAGACTTTTTTAAATTCTTCCTTAGCTCTATTTAAAACCCCCTCATTATGAAc                                                                                 <  1:1878221/100‑1 (MQ=255)

                                             ataGGTAATACTTTTTTAAATTCTTCCTTAGCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTa                                        <  1:489899/100‑1 (MQ=255)

                                             ataGGTAATACTTTTTTAAATTCTTCCTTAGCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTa                                        <  1:588928/100‑1 (MQ=255)

                                               aGGTAATACTTTTTTAAATTCTTCCTTAGCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGAGTTTACTTCTCTAACATCTaag                                      <  1:1482800/100‑2 (MQ=255)

                                                ggTAATACTTTTTTAAATTCTTCCTTAGCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATg                                     <  1:3465321/100‑1 (MQ=255)

                                                    aTACTTTTTTAAATTCTTCCTTAGCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGcaca                                 <  1:22802/100‑1 (MQ=255)

                                                    aTACTTTTTTAAATTCTTCCTTAGCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGcaca                                 <  1:2884124/100‑1 (MQ=255)

                                                     tACTTTTTTAAATTCTTCCTTAGCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGcacaa                                <  1:5197028/100‑2 (MQ=255)

                                                      aCTTTTTTAAATTCTTCCTTAGCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATa                               <  1:1708211/100‑1 (MQ=255)

                                                                       tcttgCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTa              <  1:772971/96‑1 (MQ=255)

                                                                        cgatctctATTCAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAc             <  1:5139736/96‑1 (MQ=255)

                                                                         ttgCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAcc            <  1:3915623/98‑1 (MQ=255)

                                                                         tgcctctATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAcc            <  1:4584446/97‑1 (MQ=255)

                                                                         tctctctATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAcc            <  1:2179832/97‑1 (MQ=255)

                                                                         tAGCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAcc            <  1:3561261/100‑1 (MQ=255)

                                                                         tAGCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAcc            <  1:5234355/100‑1 (MQ=255)

                                                                         tAGCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAcc            <  1:2541315/100‑1 (MQ=255)

                                                                         tAGCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAAGTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAcc            <  1:5519321/100‑1 (MQ=255)

                                                                         gatctctATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAcc            <  1:3691749/97‑1 (MQ=255)

                                                                         gaGCTCTATTTAAATCCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAcc            <  1:4345151/99‑1 (MQ=255)

                                                                         gaGCCCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAcc            >  1:626666/2‑100 (MQ=255)

                                                                         ctgCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAcc            <  1:4095712/98‑1 (MQ=255)

                                                                         ctgCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAcc            <  1:3021944/98‑1 (MQ=255)

                                                                         ctgCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAcc            <  1:653256/98‑1 (MQ=255)

                                                                         ctagcctATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAcc            <  1:3843582/95‑1 (MQ=255)

                                                                         atcttctATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTAcc            <  1:5331083/96‑1 (MQ=255)

                                                                          tgCTCAATTTAAAACCCTCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCa           <  1:4678649/99‑1 (MQ=255)

                                                                          tgCTCAATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCa           <  1:5066459/99‑1 (MQ=255)

                                                                           tctctATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTTCCTGTACCAg          <  1:581245/99‑1 (MQ=255)

                                                                           gttctATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCat          <  1:4317640/98‑2 (MQ=255)

                                                                           gatttATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAg          <  1:1151023/96‑1 (MQ=255)

                                                                           gCTCTGTTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAg          <  1:3045777/100‑1 (MQ=255)

                                                                           gCTCTATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAg          <  1:2096505/100‑1 (MQ=255)

                                                                            ctctATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGt         <  1:2051558/100‑1 (MQ=255)

                                                                            ctccATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGt         <  1:629536/100‑1 (MQ=255)

                                                                             tctATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGtt        <  1:1732407/100‑1 (MQ=255)

                                                                             tctATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGtt        <  1:2887454/100‑1 (MQ=255)

                                                                             tcgaTTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGtt        <  1:5734850/97‑1 (MQ=255)

                                                                              tcttccgatctCCCCTCATTATGAACAATAAAT‑AAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:567195/90‑1 (MQ=255)

                                                                              ctATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGttt       <  1:5276932/100‑2 (MQ=255)

                                                                              ctATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTg       <  1:3465189/100‑1 (MQ=255)

                                                                               tttttAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:2579655/98‑1 (MQ=255)

                                                                               tgtttAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:3532988/98‑1 (MQ=255)

                                                                               tctttAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:2848010/98‑1 (MQ=255)

                                                                               tccgatctaTCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:1474058/92‑1 (MQ=255)

                                                                               tagttAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:2933063/97‑1 (MQ=255)

                                                                               tATTTAAAACCTCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:974138/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATTAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATGTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:1560426/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:4828740/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:4877657/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:4512647/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:3740045/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:4483200/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:4378132/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:5211770/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:5517555/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:840937/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:3908247/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:4045101/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:2690117/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:3773737/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:2038911/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:1268717/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:2038700/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:1455052/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:365170/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:1673159/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:1982606/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGCTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:1004324/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAATCTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:386514/100‑1 (MQ=255)

                                                                               tATTTAAAACCCCCTCATTATGAACAATAAATAAAAACTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:4555661/100‑1 (MQ=255)

                                                                               gctttccgaTCTCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:4310206/92‑1 (MQ=255)

                                                                               cttccgatctCCCCTTATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:1075820/91‑1 (MQ=255)

                                                                               cttccgatctCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:1011247/91‑1 (MQ=255)

                                                                               cttccgatctCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:5132334/91‑1 (MQ=255)

                                                                               cttccgatctCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:4730505/91‑1 (MQ=255)

                                                                               cttccgatctCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:3320843/91‑1 (MQ=255)

                                                                               cttccgatctCCCCCCATTATTAACAATAAATAAAAATTTATTAGGGTTTTCTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:2955693/91‑1 (MQ=255)

                                                                               ctcttccgaTCTCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:2563785/92‑1 (MQ=255)

                                                                               ctcttccgaTCTCCTCACTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACAGCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:4570676/92‑1 (MQ=255)

                                                                               ctcttccgaTCTCCCCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGc      <  1:3154279/92‑1 (MQ=255)

                                                                                ttccgatctCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGcc     <  1:3463932/92‑2 (MQ=255)

                                                                                aTTTAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCa     <  1:3301881/100‑1 (MQ=255)

                                                                                 tttAAAACCCCTTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAg    <  1:5343778/100‑1 (MQ=255)

                                                                                 tttAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAg    <  1:2057053/100‑1 (MQ=255)

                                                                                 tttAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAg    <  1:869136/100‑1 (MQ=255)

                                                                                 tttAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAg    <  1:2886601/100‑1 (MQ=255)

                                                                                 tttAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAg    <  1:791369/100‑1 (MQ=255)

                                                                                 tttAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAg    <  1:1356493/100‑1 (MQ=255)

                                                                                 tttAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAg    <  1:3667468/100‑1 (MQ=255)

                                                                                 tttAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAg    <  1:1299249/100‑1 (MQ=255)

                                                                                 tttAAAACCCCCCCATTATGAGCAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAg    <  1:4776217/100‑1 (MQ=255)

                                                                                 tccgatctCCTCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAg    <  1:3891684/93‑1 (MQ=255)

                                                                                 tccgatctCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTCCTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAg    <  1:2476830/93‑1 (MQ=255)

                                                                                 tccgatctCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAg    <  1:1494085/93‑1 (MQ=255)

                                                                                 cttccgaTCTCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAg    <  1:4958837/94‑1 (MQ=255)

                                                                                 cttccgaTCTCCTCACTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAg    <  1:377344/94‑1 (MQ=255)

                                                                                  ttAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAGa   <  1:1332550/100‑1 (MQ=255)

                                                                                   tAAAACCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAGat  <  1:1417554/100‑1 (MQ=255)

TCTCTATGTTTTCCTGTCAACAATCCAAAATCACTATCATTTTTTATAGGTAATACTTTTTTAAATTCTTCCTTAGCTCTATTTAAAATCCCCTCATTATGAACAATAAATAAAAATTTATTAGGGTTTACTTCTCTAACATCTAATGCACATAAAATCGTTTTACCTGTACCAGTTGCAGAT  >  NC_007793/2616759‑2616941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`