| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,608,260 | A→C | intergenic (‑261/‑28) | SAUSA300_RS13410 ← / → SAUSA300_RS13415 | oxidoreductase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,608,260 | 0 | A | C | 100.0% | 22.2 / NA | 10 | intergenic (‑261/‑28) | SAUSA300_RS13410/SAUSA300_RS13415 | oxidoreductase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (2/8); total (2/8) | |||||||||||
TTTATTTTTAAAAATGTTGAAAAATCGTCACTTCTTTATTGTAAAAACATTATATTAGTAATAAAGTTAATACTGTGATTTATCATTCGATTGAATGATTAGAGGGAGGAATAAAACGTGACATATCATGAGCGTGTTTTAGCATTAAGAGCAGAAAGTAAAAGAACCGCATTTGATTTTCGATTC > NC_007793/2608171‑2608356 | tttatttttaAAAATGTTGAAAAATCGTCACTTCTTTATTGTAAAAACATTATATTAGTAATAAAGTTAATACTGTGATTTATCATTCGCTTGAATGAtt < 1:2311265/100‑1 (MQ=255) tttaAAAATGTTGAAAAATCGTCACTTCTTTATTGTAAAAACATTATATTAGTAATAAAGTTAATCCAGTGATTTATCATTCGCTTGAATGATTAgaggg < 1:3390/100‑1 (MQ=255) tttaAAAATGTTGAAAAATCGTCACTTCTTTATTGTAAAAACATTATATTAGTAATAAAGTTAATACTGTGATTTATCATTCGCTTGAATGATTAgaggg < 1:4097700/100‑1 (MQ=255) ttaAAAATGTTGAAAAATCGTCACTTCTTTATTGTAAAAACATTATATTAGTAATAAAGTTAATACTGTGATTTATCATTCGCTTGAATGATTAgaggga < 1:1113957/100‑1 (MQ=255) taAAAATGTTGAAAAATCGTCACTTCTTTATTGTAAAAACATTATATTAGTAATAAAGTTAATACTGTGATTTATCATTCGCTTGAATGATTAgagggag < 1:4755262/100‑1 (MQ=255) aaaaaTGTTGAAAAATCGTCACTTCTTTATTGTAAAAACATTATATTAGTAATAAAGTTAATACTGTGATTTATCATTCGCTTGAATGATTAgagggagg < 1:2226921/100‑1 (MQ=255) tCACTTCTTTATTGTAAAAACATTATATTAGTAATAAAGTTAATACTGTGATTTATCATTCGCTTGAATGATTAGAGGGAGGAATAAAACGTGACATATc < 1:2596004/100‑1 (MQ=255) cttcttTATTGTAAAAACATTATATTAGTAATAAAGTTAATACTGTGATTTATCATTCGCTTGAATGATTAGAGGGAGGAATAAAACGTGACATATCATg < 1:3465754/100‑1 (MQ=255) ttATTGTAAAAACATTATATTAGTAATAAAGTTAATACTGTGATTTATCATTCGCTTGAATGATTAGAGGGAGGAATAAAACGTGACATATCATGAGCgt > 1:68469/1‑100 (MQ=255) tCGCTTGAATGATTAGAGGGAGGAATAAAACGTGACATATCATGAGCGTGTTTTAGCATTAAGAGCAGAAAGTAAAAGAACCGCATTTGACTttcgattc > 1:2715046/1‑100 (MQ=255) | TTTATTTTTAAAAATGTTGAAAAATCGTCACTTCTTTATTGTAAAAACATTATATTAGTAATAAAGTTAATACTGTGATTTATCATTCGATTGAATGATTAGAGGGAGGAATAAAACGTGACATATCATGAGCGTGTTTTAGCATTAAGAGCAGAAAGTAAAAGAACCGCATTTGATTTTCGATTC > NC_007793/2608171‑2608356 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |