| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,534,863 | C→T | A12A (GCG→GCA) | SAUSA300_RS13020 ← | amino acid ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,534,863 | 0 | C | T | 99.1% | 303.4 / NA | 106 | A12A (GCG→GCA) | SAUSA300_RS13020 | amino acid ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (4/101); total (4/102) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 109 total aligned reads displayed.
TAATCAATCCTAAAACAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGCGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCACCGTTTTCCTCGATTTTTTTCA > NC_007793/2534766‑2534958 | taatCAATCCTAAAACAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAgtgc < 1:5721664/100‑1 (MQ=255)taatCAATCCTAAAACAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAgtgc < 1:3809771/100‑1 (MQ=255)taatCAATCCTAAAACAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAgtgc < 1:3611845/100‑1 (MQ=255) aatcaatcCTAAAACAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCa < 1:973403/100‑1 (MQ=255) tcaatcCTAAAACAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCAtg < 1:5658861/100‑1 (MQ=255) tcaatcCTAAAACAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCAtg < 1:261692/100‑1 (MQ=255) caatcCTAAAACAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCAtgt < 1:5509083/100‑1 (MQ=255) caatcCTAAAACAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCAtgt < 1:3146160/100‑1 (MQ=255) atcCTAAAACAAATGTAACTAATGTAATAGGAATTGAGTATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCAtgttg < 1:4762859/100‑1 (MQ=255) tcCTAAAACAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAACCCTTCTAGCATAGGTCCGAAAGCTTGTTCTGCAGCATCTAGTGCAtgttgt < 1:3957627/100‑1 (MQ=255) tcCTAAAACAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCAtgttgt < 1:1162400/100‑1 (MQ=255) tcCTAAAACAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCAtgttgt < 1:3948037/100‑1 (MQ=255) tcCTAAAACAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCAtgttgt < 1:1769420/100‑1 (MQ=255) cTAAAACAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCAtgttgttt < 1:2226923/100‑2 (MQ=255) aaaaCAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATgttgttgtt < 1:4466378/100‑1 (MQ=255) aaaCAAATGTAACTAATGTAATAGGAATTGAATATTTGTCCAAACCTTCAAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCAtgttgttgtag < 1:801295/100‑3 (MQ=255) aaCAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTCTGCAGCATCTAGTGCATGTTGTTGTTca < 1:5260445/100‑2 (MQ=255) aCAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGTTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCgt < 1:690959/100‑2 (MQ=255) aCAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGc < 1:3417445/100‑1 (MQ=255) aCAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTCTTGCAGCATCTAGTGCATGTTGTTGTTCGc < 1:2245591/100‑1 (MQ=255) cAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAGACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCgta < 1:2395299/100‑3 (MQ=255) cAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCt < 1:5090375/100‑1 (MQ=255) cAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCCTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCt < 1:4875289/100‑1 (MQ=255) aaTGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTat < 1:3306265/100‑1 (MQ=255) tggaaCTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:3996413/97‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCCAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:4599565/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAGCCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:1440847/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:425811/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:43412/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:419530/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:4142720/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:4399328/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:3960448/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:1484213/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:3942865/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:5094923/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:4811241/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:4137679/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:5297536/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:542693/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:5460944/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:5635004/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:5730818/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:59000/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:911448/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:92276/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:930550/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:982299/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:1633332/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:1868070/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:2295182/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:187993/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:2809473/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:2186682/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTattt < 1:3238801/100‑1 (MQ=255) tGTAACTAATGTAATAGGAATTGAATATTGGACCAAGCCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATATAGTGAATGTTGTTGTTCGCTattt < 1:651363/100‑1 (MQ=255) gTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCAtgttgttgtaagtatttgc < 1:2098092/100‑11 (MQ=255) tAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTatttagattt < 1:320407/100‑1 (MQ=255) tAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTatttagattt < 1:1215589/100‑1 (MQ=255) tAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTatttagattt < 1:4841925/100‑1 (MQ=255) tAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTatttagattt < 1:5765687/100‑1 (MQ=255) tAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTatttagattt < 1:2186214/100‑1 (MQ=255) tAATGTAATAGGAATTGAATATTTGACCAAACCTACTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGCGCATGTTGTTGTTCGCTatttagattt < 1:2475030/100‑1 (MQ=255) aaTTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTg < 1:1863253/100‑1 (MQ=255) tGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGAcc < 1:3278347/100‑1 (MQ=255) tGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGAcc < 1:936434/100‑1 (MQ=255) gAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCa < 1:4791754/100‑1 (MQ=255) tGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCAta < 1:4796058/100‑2 (MQ=255) tGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGAATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCAtt < 1:1713335/100‑1 (MQ=255) cAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCtt < 1:3515483/100‑1 (MQ=255) cAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCtt < 1:1317985/100‑1 (MQ=255) aaaCCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTa < 1:2518640/100‑1 (MQ=255) ccTGCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGGTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCt < 1:4291939/100‑1 (MQ=255) ttCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTAt < 1:1139769/100‑1 (MQ=255) tCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTagc < 1:2677694/100‑3 (MQ=255) tAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTGTTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTAtttt < 1:3211062/100‑1 (MQ=255) tAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTCCCTAtttt < 1:2691486/100‑1 (MQ=255) tAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTAtttt < 1:2289320/100‑1 (MQ=255) tAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTAtttt < 1:3730685/100‑1 (MQ=255) tAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTAtttt < 1:3284000/100‑1 (MQ=255) aTAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCt < 1:2420808/100‑1 (MQ=255) tAGGTCCGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTa < 1:5500456/100‑1 (MQ=255) cagggacGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTa > 1:5452036/7‑100 (MQ=255) ccGAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCa > 1:1891388/1‑100 (MQ=255) gAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCAcc < 1:3965268/100‑1 (MQ=255) gAAAGCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCAcc < 1:4951975/100‑1 (MQ=255) gCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCACCGttt < 1:1703047/100‑1 (MQ=255) gCTTGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCACCGttt < 1:2782950/100‑1 (MQ=255) tGTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCACCGTTTTcc > 1:5418012/1‑100 (MQ=255) gTTTTGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCACCGTTTTCCt < 1:2895465/100‑1 (MQ=255) ttttGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCACCGTTTTccgg < 1:4475382/100‑3 (MQ=255) ttttGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCACCGTTTTCCtg < 1:4044868/100‑2 (MQ=255) tttGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCACCGTTTTCCTCg < 1:4228926/100‑1 (MQ=255) tttGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCACCGTTTTCCTCg < 1:1373679/100‑1 (MQ=255) tttGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCACCGTTTTCCTCg < 1:1539730/100‑1 (MQ=255) ttGCAGCATCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCACCGTTTTCCTCGa > 1:2722092/1‑100 (MQ=255) cagcaTCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCACCGTTTTCCTCggcac < 1:3320120/100‑5 (MQ=255) agcaTCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAGCCATTTCTTGCCTATTTTAGCTAATTCACCGTTTTCCTCGAtttg < 1:1951791/100‑2 (MQ=255) agcaTCTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCACCGTTTTCCTCGAtgat < 1:2782799/100‑4 (MQ=255) cTAGTGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCACCGTTTTCCTCGATTTTTTTCa < 1:856142/100‑1 (MQ=255) | TAATCAATCCTAAAACAAATGTAACTAATGTAATAGGAATTGAATATTTGACCAAACCTTCTAGCATAGGTCCGAAAGCTTGTTTTGCAGCATCTAGCGCATGTTGTTGTTCGCTATTTAGATTTAGAAACATCTTGACCAAACCATTTCTTACCTATTTTAGCTAATTCACCGTTTTCCTCGATTTTTTTCA > NC_007793/2534766‑2534958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |