D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,530,526	A→T	V25D (GTT→GAT)	SAUSA300_RS12990 ←	prevent‑host‑death protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,530,526	0	A	T	100.0%	344.4 / NA	123	V25D (GTT→GAT)	SAUSA300_RS12990	prevent‑host‑death protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (5/118); total (5/118)

Only 100 of 127 total aligned reads displayed.

TTCTGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATAACACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCTTTTAACACA  >  NC_007793/2530430‑2530622

ttCTGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATAtcac                                                                                               <  1:442572/100‑1 (MQ=255)

ttCTGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATAtcac                                                                                               <  1:4057537/100‑1 (MQ=255)

 tCTGTTGGAGGTAAGGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACt                                                                                              <  1:2898843/100‑1 (MQ=255)

 tCTGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACt                                                                                              <  1:3296347/100‑1 (MQ=255)

 tCTGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACt                                                                                              <  1:3498194/100‑1 (MQ=255)

   tGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTat                                                                                            <  1:1759994/100‑1 (MQ=255)

     ggggAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTatca                                                                                          >  1:5778763/3‑100 (MQ=255)

        gAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTatcatct                                                                                       <  1:3184990/100‑2 (MQ=255)

         aGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTatcaagct                                                                                      <  1:4535296/100‑5 (MQ=255)

                    ttCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTc                                                                           <  1:415667/100‑1 (MQ=255)

                    ttCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTc                                                                           <  1:1924841/100‑1 (MQ=255)

                    cgatcttgtGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTc                                                                           <  1:2171013/92‑1 (MQ=255)

                     tCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCa                                                                          <  1:867532/100‑1 (MQ=255)

                      tccgatctgggTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCAt                                                                         <  1:399802/90‑1 (MQ=255)

                      cgatcttGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCAt                                                                         <  1:1873566/98‑1 (MQ=255)

                      cgatctgggggTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCAt                                                                         <  1:3247819/90‑1 (MQ=255)

                      ccgatctGGGGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCAt                                                                         <  1:1392123/94‑1 (MQ=255)

                       catcatGGAGTTATAATCTGATTCTGACATGATTACTATGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCagg                                                                        <  1:1617398/100‑3 (MQ=255)

                       catcatGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCAtg                                                                        <  1:1971364/100‑2 (MQ=255)

                       catcatGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATa                                                                        <  1:256445/100‑1 (MQ=255)

                       catcatGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATa                                                                        <  1:2595517/100‑1 (MQ=255)

                       catcatGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATa                                                                        <  1:2260323/100‑1 (MQ=255)

                       catcatGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATa                                                                        <  1:1331745/100‑1 (MQ=255)

                       catcatGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATa                                                                        <  1:4423934/100‑1 (MQ=255)

                             ggAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGcc                                                                  <  1:411163/100‑1 (MQ=255)

                             ggAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGcc                                                                  <  1:4454403/100‑1 (MQ=255)

                             ggAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCACCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGcc                                                                  <  1:561394/100‑1 (MQ=255)

                              gggTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGccg                                                                 <  1:5510586/98‑2 (MQ=255)

                              gAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCt                                                                 <  1:3224870/100‑1 (MQ=255)

                              gAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCt                                                                 <  1:1273836/100‑1 (MQ=255)

                               tcttccgaTCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCtt                                                                <  1:1140805/93‑1 (MQ=255)

                               aGTTATAATCTGATTCTGACATGATTACTACGTTTTTCTCATCAGTAGATGTTACAGTTACCATATCACTATCTTCATTTACTTTTGTCATAAGTGCCtg                                                                <  1:5402130/100‑2 (MQ=255)

                               aGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATTTCACTATCATCATTTTCTTTTGTCATAAGTGccga                                                                <  1:5681377/100‑3 (MQ=255)

                               aGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCtt                                                                <  1:1905276/100‑1 (MQ=255)

                               aGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCtt                                                                <  1:4549039/100‑1 (MQ=255)

                               aGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCtt                                                                <  1:1595384/100‑1 (MQ=255)

                               aGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCtg                                                                <  1:3773283/100‑2 (MQ=255)

                               aGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCta                                                                <  1:447024/100‑2 (MQ=255)

                               aGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCta                                                                <  1:4603774/100‑2 (MQ=255)

                               aGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACCATCATCATTTACTTTTGTCATAAGTGCCtt                                                                <  1:2245113/100‑1 (MQ=255)

                                gTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCttt                                                               <  1:699085/100‑1 (MQ=255)

                                gTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCttt                                                               <  1:3083450/100‑1 (MQ=255)

                                gTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCttt                                                               <  1:4723294/100‑1 (MQ=255)

                                gTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCttt                                                               <  1:942772/100‑1 (MQ=255)

                                gTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCtta                                                               <  1:3024886/100‑2 (MQ=255)

                                 ttATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTa                                                              <  1:5561252/100‑1 (MQ=255)

                                         tGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGt                                                      <  1:5688257/100‑1 (MQ=255)

                                          gATTCTGACATGATTATTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTggg                                                     <  1:5421088/100‑3 (MQ=255)

                                          gATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGta                                                     <  1:2410510/100‑2 (MQ=255)

                                          gATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTc                                                     <  1:4677470/100‑1 (MQ=255)

                                           aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTcc                                                    <  1:2408692/100‑2 (MQ=255)

                                           aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg                                                    <  1:4506244/100‑1 (MQ=255)

                                           aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg                                                    <  1:1649800/100‑1 (MQ=255)

                                           aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg                                                    <  1:1979197/100‑1 (MQ=255)

                                           aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg                                                    <  1:1072133/100‑1 (MQ=255)

                                           aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg                                                    <  1:4642883/100‑1 (MQ=255)

                                           aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg                                                    <  1:4149738/100‑1 (MQ=255)

                                           aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg                                                    <  1:2484069/100‑1 (MQ=255)

                                           aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg                                                    <  1:3895854/100‑1 (MQ=255)

                                           aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg                                                    <  1:3793221/100‑1 (MQ=255)

                                           aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg                                                    <  1:3557272/100‑1 (MQ=255)

                                           aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg                                                    <  1:264483/100‑1 (MQ=255)

                                           aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg                                                    <  1:5024720/100‑1 (MQ=255)

                                             tCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAg                                                  <  1:1647801/100‑1 (MQ=255)

                                              cTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGc                                                 >  1:510220/1‑100 (MQ=255)

                                                gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt                                               <  1:4682643/100‑1 (MQ=255)

                                                gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt                                               <  1:1182020/100‑1 (MQ=255)

                                                gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt                                               <  1:4795996/100‑1 (MQ=255)

                                                gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt                                               <  1:1615002/100‑1 (MQ=255)

                                                gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt                                               <  1:297676/100‑1 (MQ=255)

                                                gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt                                               <  1:1954907/100‑1 (MQ=255)

                                                gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt                                               <  1:2041303/100‑1 (MQ=255)

                                                gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt                                               <  1:2211596/100‑1 (MQ=255)

                                                gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt                                               <  1:4101712/100‑1 (MQ=255)

                                                gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt                                               <  1:2500481/100‑1 (MQ=255)

                                                gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt                                               <  1:256961/100‑1 (MQ=255)

                                                gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAATGCCTTTAAATTCTGTCGAGCGt                                               <  1:1801974/100‑1 (MQ=255)

                                                 aCATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCgag                                              <  1:934756/100‑3 (MQ=255)

                                                 aCATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTa                                              <  1:4523864/100‑1 (MQ=255)

                                                 aCATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTa                                              <  1:1351674/100‑1 (MQ=255)

                                                  cATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTac                                             <  1:423311/100‑2 (MQ=255)

                                                  cATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTaa                                             <  1:2100518/100‑2 (MQ=255)

                                                   aTGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATg                                            <  1:2887076/100‑1 (MQ=255)

                                                      aTTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGaat                                         <  1:5583089/100‑1 (MQ=255)

                                                                         caGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATAtt                      >  1:5262871/1‑100 (MQ=255)

                                                                                 gTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGcct              <  1:4583880/100‑1 (MQ=255)

                                                                                  ttACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGcctg             <  1:5275815/100‑2 (MQ=255)

                                                                                  ttACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGcctc             <  1:1091671/100‑1 (MQ=255)

                                                                                   tACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATACTTATCGcctca            <  1:4603922/100‑2 (MQ=255)

                                                                                      aGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCttt         <  1:3040474/100‑1 (MQ=255)

                                                                                      aGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCttg         <  1:1616577/100‑2 (MQ=255)

                                                                                       gTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCtttt        <  1:31520/100‑1 (MQ=255)

                                                                                       gTTACCATATCACTAGCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCttta        <  1:405215/100‑2 (MQ=255)

                                                                                        ttACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTGGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCTTTTa       <  1:4378017/100‑1 (MQ=255)

                                                                                        ttACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCTTTTa       <  1:2118632/100‑1 (MQ=255)

                                                                                        ttACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTATCGAGCGTATGAATAATTTTTAATAACCATATTTATCGCCTCCTTTTa       <  1:5566072/100‑1 (MQ=255)

                                                                                          aCCATATCACTATCATCATTCACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCTTTTAac     <  1:2084273/100‑1 (MQ=255)

                                                                                            cATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCTTTTAacac   <  1:4288212/100‑1 (MQ=255)

                                                                                             atatCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCTTTTAacaca  <  1:4545783/100‑1 (MQ=255)

                                                                                             atatCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTCTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCTTTTAacaca  <  1:3508266/100‑1 (MQ=255)

TTCTGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATAACACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCTTTTAACACA  >  NC_007793/2530430‑2530622

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`