| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,524,088 | G→T | L132I (CTT→ATT) | SAUSA300_RS12950 ← | nitrite reductase large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,524,088 | 0 | G | T | 100.0% | 36.7 / NA | 14 | L132I (CTT→ATT) | SAUSA300_RS12950 | nitrite reductase large subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (4/10); total (4/10) | |||||||||||
CACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAA‑CCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGT > NC_007793/2524001‑2524177 | cacaCTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTccaa‑cc < 1:3440428/100‑1 (MQ=255) aaaCCTAGTAATCCTACACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAATCGTGCTCCAATCCAATTacc > 1:2869545/1‑99 (MQ=255) tAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAA‑CCAATTACACTCGGt < 1:724618/100‑1 (MQ=255) ccaccaATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAA‑CCAATTACACTCGGTAATGTCGAAc > 1:1937906/1‑100 (MQ=255) caccaATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAA‑CCAATTACACTCGGTAATGTCGAAcc > 1:5411483/1‑100 (MQ=255) accaATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAA‑CCAATTACACTCGGTAATGTCGAACct < 1:299864/100‑1 (MQ=255) aCAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAA‑CCAATTACACTCGGTAATGTCGAACctggaactg < 1:2479258/100‑1 (MQ=255) cAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAA‑CCAATTACACTCGGTAATGTCGAACctggaactgg < 1:218526/100‑1 (MQ=255) gTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAA‑CCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAg < 1:2170054/100‑1 (MQ=255) aTGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAA‑CCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTct < 1:3063376/100‑2 (MQ=255) tGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAA‑CCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGc < 1:3970447/100‑1 (MQ=255) ttCATCATTTGTTCAGTATCATCAATCGTTCTCCAA‑CCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCaa < 1:24113/100‑1 (MQ=255) cAGTATCATCAATCGTTCTCCAA‑CCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATc > 1:3348380/1‑100 (MQ=255) gTATCATCAATCGTTCTCCAA‑CCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGt < 1:2555992/100‑1 (MQ=255) | CACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAA‑CCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGT > NC_007793/2524001‑2524177 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |