| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,501,150 | T→G | intergenic (+1311/‑177) | SAUSA300_RS12850 → / → SAUSA300_RS12855 | hypothetical protein/transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,501,150 | 0 | T | G | 100.0% | 22.6 / NA | 10 | intergenic (+1311/‑177) | SAUSA300_RS12850/SAUSA300_RS12855 | hypothetical protein/transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (4/6); total (4/6) | |||||||||||
TATTAATTATGCACCAAATAATTTAATTAGACTCTATCGAAAATTTCCAAATTTTGCTTACTATCTTTCTAATTTTACTTTTATATTGTTCGCAATGCATAAAAACAAGCGTTTTCCTAGGAGTTTTCATTAATTTCTTTTATTTTTCACTATTACCTTTTCAAAAATATTCAACTAT > NC_007793/2501061‑2501238 | tatTAATTATGCACCAAATAATTTAATTAGACTCTATCGAAAATTTCCAAATTTTGCTTACTATCTTTCTAATTTTACTTTTATATTGTGCGCAATGCAt < 1:1313513/100‑1 (MQ=255)tatTAATTATGCACCAAATAATTTAATTAGACTCTATCGAAAATTTCCAAATTTTGCTTACTATCTTTCTAATTTTACTTTTATATTGTGCGCAATGCAt < 1:1787488/100‑1 (MQ=255) gtgccAAATAATTTAATTAGACTCTATCGAAAATTTCCAAATTTTGCTTACTATCTTTCTAATTTTACTTTTATATTGTGCGCAATGCATAAAAACAAGc > 1:1286178/4‑100 (MQ=255) cttccgaTCTTTCTATTTTTACTTTTATATTGTGCGCAATGCATAAAAACAAGCGTTTTCCTAGGAGTTTTCATTAATTTCTTTTATTTTTCACTATTAc < 1:1117738/94‑1 (MQ=255) tccgaTCTTTCTTGTTTTACTTTTATATTGTGCGCAATGCATAAAAACAAGCGTTTTCCTAGGAGTTTTCATTAATTTCTTTTATTTTTCACTATTAccg < 1:5202955/96‑2 (MQ=255) tACTATCTTTCTAATTTTACTTTTATATTGTGCGCAATGCATAAAAACAAGCGTTTTCCTAGGAGTTTTCATTAATTTCTTTTATTTTTCACTATTACCt > 1:897039/1‑100 (MQ=255) ccgaTCTTTCTGCTTTTACTTTTATATTGTGCGCAATGCATAAAAACAAGCGTTTTCCTAGGAGTTTTCATTAATTTCTTTTATTTTTCACTATTACCtt < 1:3305401/97‑1 (MQ=255) aCTATCTTTCTAATTTTACTTTTATATTGTGCGCAATGCATAAAAACAAGCGTTTTCCTAGGAGTTTTCATTAATTTCTTTTATTTTTCACTATTACCtt > 1:2754614/1‑100 (MQ=255) gtgtgcTAATTTTACTTTTATATTGTGCGCAATGCATAAAAACAAGCGTTTTCCTAGGAGTTTTCATTAATTTCTTTTATTTTTCACTATTACCTTTTCa > 1:4269452/6‑100 (MQ=255) ttttATATTGTGCGCAATGCATAAAAACAAGCGTTTTCCTAGGAGTTTTCATTAATTTCTTTTATTTTTCACTATTACCTTTTCAAAAATATTCAACtat < 1:565227/100‑1 (MQ=255) | TATTAATTATGCACCAAATAATTTAATTAGACTCTATCGAAAATTTCCAAATTTTGCTTACTATCTTTCTAATTTTACTTTTATATTGTTCGCAATGCATAAAAACAAGCGTTTTCCTAGGAGTTTTCATTAATTTCTTTTATTTTTCACTATTACCTTTTCAAAAATATTCAACTAT > NC_007793/2501061‑2501238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |