Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 2,445,965 G→A intergenic (‑474/+13) SAUSA300_RS12570 ← / ← SAUSA300_RS12575 membrane protein/oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077932,445,9650GA100.0% 18.0 / NA 8intergenic (‑474/+13)SAUSA300_RS12570/SAUSA300_RS12575membrane protein/oxidoreductase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (3/5);  total (3/5)

ACACACCTTTACCGACTATTTAAAATACACTTCACCAATTCATTTTAATTTAATGGATTGAAGTAACTAAATTAATATTATGTTGTTCAATTAAAAGCTTCATACAAACCTAATCTATTTGCACTCCACCGCTAACACCGAACACTTGTCCGGTTGTATAACTTGATTCTTCTGACGCTAATAGCACATAAG  >  NC_007793/2445869‑2446060
                                                                                                |                                                                                               
acacacCTTTACCGACTATTTAAAATACACTTCACCAATTCATTTTAATTTAATGGATTGAAGTAACTAAATTAATATTATGTTGTTCAATTAAAAACtt                                                                                              >  1:3983905/1‑100 (MQ=255)
 cacacCTTTACCGACTATTTAAAATACACTTCACCAATTCATTTTAATTTAATGGATTGAAGTAACTAAATTAATATTATGTTGTTCAATTAAAAACTTc                                                                                             >  1:4405285/1‑100 (MQ=255)
                      aaaTACACTTCACCAATTCATTTTAATTTAATGGATTGAAGTAACTAAATTAATATTATGTTGTTCAATTAAAAACTTCATACAAACCTAATCTATTTGc                                                                        <  1:1878075/100‑1 (MQ=255)
                       aaTACACTTCACCAATTCATTTTAATTTAATGGATTGAAGTAACTAAATTAATATTATGTTGTTCAATTAAAAACTTCATACAAACCTAATCTATTTGCa                                                                       <  1:1752787/100‑1 (MQ=255)
                                 aCCAATTCATTTTAATTTAATGGATTGAAGTAACTAAATTAATATTATGTTGTTCAATTAAAAACTTCATACAAACCTAATCTATTTGCACTCCACCGCt                                                             <  1:3103268/100‑1 (MQ=255)
                                  gatcttctctttaatttaaTGGATTGAAGTAACTAAATTAATATTATGTTGTTCAATTAAAAACTTCATACAAACCTAATCTATTTGCACTCCACCGCTa                                                            <  1:5071957/91‑1 (MQ=255)
                                                                                      tCAATTAAAAACTTCATACAAACCTAATCTATTTGCACTCCACCGCTAACACCGAACACTTGTCCGGTTGTATAACTTGATTCTTCTGACGCTAATAGca        <  1:3782175/100‑1 (MQ=255)
                                                                                            aaaaACTTCATACAAACCTAATCTATTTGCACTCCACCGCTAACACCGAACACTTGTCCGGTTGTATAACTTGATTCTTCTGACGCTAATAGCACATAAg  >  1:2211427/1‑100 (MQ=255)
                                                                                                |                                                                                               
ACACACCTTTACCGACTATTTAAAATACACTTCACCAATTCATTTTAATTTAATGGATTGAAGTAACTAAATTAATATTATGTTGTTCAATTAAAAGCTTCATACAAACCTAATCTATTTGCACTCCACCGCTAACACCGAACACTTGTCCGGTTGTATAACTTGATTCTTCTGACGCTAATAGCACATAAG  >  NC_007793/2445869‑2446060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑