Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 2,313,223 T→C L239L (TTA→TTG)  SAUSA300_RS11775 ← siderophore synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077932,313,2230TC99.6% 2854.5 / ‑5.4 965L239L (TTA→TTG) SAUSA300_RS11775siderophore synthetase
Reads supporting (aligned to +/- strand):  ref base T (0/4);  new base C (13/948);  total (13/952)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 966 total aligned reads displayed.

TTTTTAGCAATCCATGCTTCAAAATATTTCCCTATCGTATGATCATATTGCCAAGGATGTACTAAAATCGCTCTATAGTCTTCACTTTTCAAACCTAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGCACACAACATGG  >  NC_007793/2313128‑2313322
                                                                                               |                                                                                                   
                   cAAAATATTTCCCTATCGTATGATCATATTGCCAAGGATGTACTAAAATCGCTCTATAGTCTTCACTTTTCAAACCCAAACTCTTTAAAAACACACGagc                                                                              <  1:1063724/100‑3 (MQ=255)
                           ttCCCTATCGTATGATCATATTGCCAAGGATGTACTAAAATCGCTCTATAGCCTTCACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTgt                                                                      <  1:3259112/100‑1 (MQ=255)
                                                                      ttccgatcttttCACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAcc                           <  1:4317053/90‑1 (MQ=255)
                                                                      tcttccgatCTTTACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAcc                           <  1:3404007/92‑1 (MQ=255)
                                                                      tcttccgatCTTCACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAcc                           <  1:2101269/92‑1 (MQ=255)
                                                                      tcttccgatCTTCACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAcc                           <  1:358922/92‑1 (MQ=255)
                                                                      tcttccgatCTTCACTCTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAcc                           <  1:4586116/92‑1 (MQ=255)
                                                                       cttccgatCTTAACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAcca                          <  1:1874265/93‑1 (MQ=255)
                                                                        ttccgatCTTCGCGTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAccat                         <  1:5629528/94‑1 (MQ=255)
                                                                           cgatCTTCACTCTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAccatcca                      <  1:2847437/97‑1 (MQ=255)
                                                                            atctctCACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAccatccat                     <  1:4817712/95‑1 (MQ=255)
                                                                                 tcgcTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtg                <  1:4452209/97‑1 (MQ=255)
                                                                                 tCACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtg                <  1:3808742/100‑1 (MQ=255)
                                                                                 tCACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtg                >  1:5780425/1‑100 (MQ=255)
                                                                                 tCACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtg                <  1:268137/100‑1 (MQ=255)
                                                                                 tCACCTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtg                <  1:4777652/100‑1 (MQ=255)
                                                                                 tCACCTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCACAGCtg                <  1:418449/100‑1 (MQ=255)
                                                                                 tCAATTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGGAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtg                <  1:1288408/100‑1 (MQ=255)
                                                                                 gtaCTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtg                <  1:475497/98‑1 (MQ=255)
                                                                                 ccACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtg                <  1:2186099/99‑1 (MQ=255)
                                                                                  ctcTTTTCAAACCCAAACTCTTTAAAAACACACGAAACTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt               <  1:1251421/98‑1 (MQ=255)
                                                                                  cgtttttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt               <  1:4231521/97‑1 (MQ=255)
                                                                                  cgcTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt               <  1:787355/98‑1 (MQ=255)
                                                                                  catttttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt               <  1:1540420/97‑1 (MQ=255)
                                                                                  cacaTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt               <  1:5426212/100‑1 (MQ=255)
                                                                                  cACTTTTCAAACCCAAACTCTTTAAGAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt               <  1:5113128/100‑1 (MQ=255)
                                                                                  cACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGGTTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgg               <  1:3341004/100‑2 (MQ=255)
                                                                                  cACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt               <  1:1329073/100‑1 (MQ=255)
                                                                                  cACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgg               <  1:2153055/100‑2 (MQ=255)
                                                                                  cACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtga               <  1:2406607/100‑2 (MQ=255)
                                                                                  cACTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAATATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtga               <  1:3767690/100‑2 (MQ=255)
                                                                                  cACTCTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt               <  1:2547435/100‑1 (MQ=255)
                                                                                  cACTCTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt               <  1:1488979/100‑1 (MQ=255)
                                                                                   ttttttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtt              <  1:4703678/98‑2 (MQ=255)
                                                                                   acctttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtg              <  1:1622441/97‑1 (MQ=255)
                                                                                   aCTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtt              <  1:3650128/100‑2 (MQ=255)
                                                                                   aCTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtg              <  1:849329/100‑1 (MQ=255)
                                                                                   aCTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtg              <  1:4887142/100‑1 (MQ=255)
                                                                                   aCTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtg              <  1:3678128/100‑1 (MQ=255)
                                                                                   aCTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtc              <  1:1745149/100‑2 (MQ=255)
                                                                                    tttttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:3617750/99‑1 (MQ=255)
                                                                                    tttttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:2311335/99‑1 (MQ=255)
                                                                                    gttttCAAACCCAAACTCTTTAAAAACACACGGATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:5740870/99‑1 (MQ=255)
                                                                                    ctcttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtggat             <  1:5168940/97‑4 (MQ=255)
                                                                                    ctcttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:1370184/97‑1 (MQ=255)
                                                                                    ctcttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGACCATTACCATCCATAGCtgtgt             <  1:3073323/97‑2 (MQ=255)
                                                                                    ctattCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:685153/97‑1 (MQ=255)
                                                                                    cctttCAAGCCCAATCTCTATAAAAACACACGAATCTGATTGTAGTATTCGGGAATTAGTTCATCAATAAGAAATTGATCATTACCATCCATAGCTGTGc             <  1:2916717/98‑1 (MQ=255)
                                                                                    ccgatcttaCCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:1001257/92‑1 (MQ=255)
                                                                                    cTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtgg             <  1:886921/100‑2 (MQ=255)
                                                                                    cTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:5211359/100‑1 (MQ=255)
                                                                                    cTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:2255415/100‑1 (MQ=255)
                                                                                    cTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:5590011/100‑1 (MQ=255)
                                                                                    cTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:4649605/100‑1 (MQ=255)
                                                                                    cTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:4535186/100‑1 (MQ=255)
                                                                                    cTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:1715553/100‑1 (MQ=255)
                                                                                    cTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:4419638/100‑1 (MQ=255)
                                                                                    cTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:4395092/100‑1 (MQ=255)
                                                                                    cTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:3138555/100‑1 (MQ=255)
                                                                                    cTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:3029262/100‑1 (MQ=255)
                                                                                    cTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:2964997/100‑1 (MQ=255)
                                                                                    cTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:1650623/100‑1 (MQ=255)
                                                                                    cTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:4069559/100‑1 (MQ=255)
                                                                                    cTTTTCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc             <  1:3907916/100‑1 (MQ=255)
                                                                                     ttttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGca            <  1:3848742/100‑1 (MQ=255)
                                                                                     ttttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGca            <  1:1968968/100‑1 (MQ=255)
                                                                                     ttttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGca            <  1:235231/100‑1 (MQ=255)
                                                                                     ttttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGca            <  1:3958151/100‑1 (MQ=255)
                                                                                     ttttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGca            <  1:2442306/100‑1 (MQ=255)
                                                                                     ttttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGca            <  1:2485704/100‑1 (MQ=255)
                                                                                     ttttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTAca            <  1:5376954/100‑1 (MQ=255)
                                                                                     ccgatctaCCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGca            <  1:1921276/93‑1 (MQ=255)
                                                                                     atttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGca            <  1:626300/99‑1 (MQ=255)
                                                                                      tttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac           <  1:5464907/100‑1 (MQ=255)
                                                                                      tttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac           <  1:1412829/100‑1 (MQ=255)
                                                                                      tttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac           <  1:724316/100‑1 (MQ=255)
                                                                                      tttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac           <  1:5282738/100‑1 (MQ=255)
                                                                                      tttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac           <  1:5530891/100‑1 (MQ=255)
                                                                                      tttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac           <  1:3184548/100‑1 (MQ=255)
                                                                                      tttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac           <  1:5071876/100‑1 (MQ=255)
                                                                                      tttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac           <  1:1827494/100‑1 (MQ=255)
                                                                                      tttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac           <  1:4494314/100‑1 (MQ=255)
                                                                                      tttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac           <  1:4357575/100‑1 (MQ=255)
                                                                                      tttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac           <  1:4286620/100‑1 (MQ=255)
                                                                                      tttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac           <  1:4000481/100‑1 (MQ=255)
                                                                                      attCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac           <  1:2029396/99‑1 (MQ=255)
                                                                                      atctcaaCCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac           <  1:5253076/95‑1 (MQ=255)
                                                                                       ttCAAGCCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcaca          <  1:499703/100‑1 (MQ=255)
                                                                                       ttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcaca          <  1:922552/100‑1 (MQ=255)
                                                                                       ttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcaca          <  1:3285459/100‑1 (MQ=255)
                                                                                       ttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcaca          <  1:3447731/100‑1 (MQ=255)
                                                                                       ttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcaca          <  1:2736401/100‑1 (MQ=255)
                                                                                       ttCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcaca          <  1:4953979/100‑1 (MQ=255)
                                                                                        tctaaCCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcacaa         <  1:2605399/97‑2 (MQ=255)
                                                                                        tCAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcacat         <  1:2807923/100‑2 (MQ=255)
                                                                                         cAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcacagg        <  1:5686909/100‑3 (MQ=255)
                                                                                         cAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcacaca        <  1:3515714/100‑1 (MQ=255)
                                                                                         cAAACCCAAACTCTTTAAAAACACACGAATCTGATTGTAATATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcacaca        <  1:2513329/100‑1 (MQ=255)
                                                                                           aaCCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGCACacaac      <  1:1181919/100‑1 (MQ=255)
                                                                                               tAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGCACACAACGTgg  <  1:4141119/100‑1 (MQ=255)
                                                                                               |                                                                                                   
TTTTTAGCAATCCATGCTTCAAAATATTTCCCTATCGTATGATCATATTGCCAAGGATGTACTAAAATCGCTCTATAGTCTTCACTTTTCAAACCTAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGCACACAACATGG  >  NC_007793/2313128‑2313322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑