| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,262,064 | C→T | intergenic (‑132/‑20) | SAUSA300_RS11550 ← / → SAUSA300_RS11555 | oxidoreductase/transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,262,064 | 0 | C | T | 100.0% | 21.6 / NA | 10 | intergenic (‑132/‑20) | SAUSA300_RS11550/SAUSA300_RS11555 | oxidoreductase/transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (6/4); total (6/4) | |||||||||||
AAAACTTGTTACAACTATAAAAATCAATTGACATACTACTGGGAACGTATTAAATTAATATATGAACAAATATTCACATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACATTAGAACGCGTAACTGAAATTTTCAAGGCATTAGGCG > NC_007793/2261988‑2262156 | aaaaCTTGTTACAACTATAAAAATCAATTGACATACTACTGGGAACGTATTAAATTAATATATGAACAAATATTCATATGAAAGGATTGTCATATAATGt > 1:5431741/1‑100 (MQ=255) cAACTATAAAAATCAATTGACATACTACTGGGAACGTATTAAATTAATATATGAACAAATATTCATATGAAAGGATTGTCATATAATGTCAGAACAatat > 1:2969119/1‑100 (MQ=255) tGACATACTACTGGGAACGTATTAAATTAATATATGAACAAATATTCATATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGa > 1:2237734/1‑100 (MQ=255) ctactacTGGGAACGTATTAAATTAATATATGAACAAATATTCATATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACa > 1:534341/2‑100 (MQ=255) actactGGGAACGTATTAAATTAATATATGAACAAATATTCATATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACAtt < 1:335808/100‑1 (MQ=255) actGGGAACGTATTAAATTAATATATGAACAAATATTCATATGAAAGGATTGTTATATAATGTCAGAACAATATTCAGAAATAAATACAGATACATTAGa > 1:3022429/1‑100 (MQ=255) aCGTATTAAATTAATATATGAACAAATATTCATATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACATTAGAACGCGTa < 1:4984472/100‑1 (MQ=255) tATTAAATTAATATATGAACAAATATTCATATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACATTAGAACGCGTAACt < 1:4076268/100‑1 (MQ=255) tcAAATATTCATATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACATTAGAACGCGTAACTGAAATTTTCAAGGCATTa > 1:2646018/2‑100 (MQ=255) atatTCATATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACATTAGAACGCGTAACTGAAATTTTCAAGGCATTAgggc < 1:760703/100‑3 (MQ=255) | AAAACTTGTTACAACTATAAAAATCAATTGACATACTACTGGGAACGTATTAAATTAATATATGAACAAATATTCACATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACATTAGAACGCGTAACTGAAATTTTCAAGGCATTAGGCG > NC_007793/2261988‑2262156 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |