| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 45,747 | T→C | intergenic (‑377/+145) | SAUSA300_RS00195 ← / ← SAUSA300_RS00200 | hypothetical protein/recombinase RecB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 45,747 | 0 | T | C | 100.0% | 18.6 / NA | 9 | intergenic (‑377/+145) | SAUSA300_RS00195/SAUSA300_RS00200 | hypothetical protein/recombinase RecB |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (6/3); total (6/3) | |||||||||||
TGCACAATCCTTCTGTTTCTTCGAATCTGCAAATCCCAATCATTTCCCGATAAAAAATCATTGTGGGATGTTCTTTAGCAATTTCAATATAAGCATTGTATAGTTATGAAAAAATTACGACAATAACTGTTTCATTAGATAAGTGTTATTGAAATTGATAAAGAGCAATTCTTGAAAATAGTT > NC_007793/45651‑45833 | tGCACAATCCTTCTGTTTCTTCGAATCTGCAAATCCCAATCATTTCCCGATAAAAAATCATTGTGGGATGTTCTTTAGCAATTTCAATATAAGCATCGta > 1:5574930/1‑100 (MQ=255)tGCACAATCCTTCTGTTTCTTCGAATCTGCAAATCCCAATCATTTCCCGATAAAAAATCATTGTGGGATGTTCTTTAGCAATTTCAATATAAGCATCGta > 1:910219/1‑100 (MQ=255) ccTGCAAATCCCAATCATTTCCCGATAAAAAATCATTGTGGGATGTTCTTTAGCAATTTCAATATAAGCATCGTATAGTTATGAAAAAATTACGACAATa > 1:120637/2‑100 (MQ=255) gCAAATCCCAATCATTTCCCGATAAAAAATCATTGTGGGATGTTCTTTAGCAATTTCATTATAAGCATCGTATAGTTATGAAAAAATTACGACAATAACt > 1:3523864/1‑100 (MQ=255) gCAAATCCCAATCATTTCCCGATAAAAAATCATTGTGGGATGTTCTTTAGCAATTTCAATATAAGCATCGTATAGTTATGAAAAAATTACGACAATAACt > 1:1861272/1‑100 (MQ=255) gCAAATCCCAATCATTTCCCGATAAAAAATCATTGTGGGATGTTCTTTAGCAATTTCAATATAAGCATCGTATAGTTATGAAAAAATTACGACAATAACt > 1:3400814/1‑100 (MQ=255) ccgatctttCCAGATAAAAAATCATTGTGGGATGTTCTTTAGCAATTTCAATATAAGCATCGTATACTTATGAAAAAATTACGACAATAACTGTTTCAtt < 1:1253955/94‑1 (MQ=14) cAATCATTTCCCGATAAAAAATCATTGTGGGATGTTCTTTAGCAATTTCAATATAAGCATCGTATAGTTATGAAAAAATTACGACAATAACTGTTTCAtt < 1:5218569/100‑1 (MQ=255) tCAATATAAGCATCGTATAGTTATGAAAAAATTACGACAATAACTGTTTCATTAGATAAGTGTTATTGAAATTGATAAAGAGCAATTCTTGAAAATAGtt < 1:1594725/100‑1 (MQ=255) | TGCACAATCCTTCTGTTTCTTCGAATCTGCAAATCCCAATCATTTCCCGATAAAAAATCATTGTGGGATGTTCTTTAGCAATTTCAATATAAGCATTGTATAGTTATGAAAAAATTACGACAATAACTGTTTCATTAGATAAGTGTTATTGAAATTGATAAAGAGCAATTCTTGAAAATAGTT > NC_007793/45651‑45833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |