Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,131,773	A→G	S160G (AGC→GGC)	SAUSA300_RS10855 →	succinyl‑diaminopimelate desuccinylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,131,773	0	A	G	100.0%	253.8 / NA	89	S160G (AGC→GGC)	SAUSA300_RS10855	succinyl‑diaminopimelate desuccinylase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (72/17);  total (72/17)

TCATGGAACGATTAGATTACTGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATAGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCTATGTCATGTAAAGTAACTGCAACTGGTAAAGCTGTCCA  >  NC_007793/2131676‑2131867                                                                                                  |                                                                                               tCATGGAACGATTAGATTACTGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGc                                                                                              >  1:1831708/1‑100 (MQ=255)  cATGGAACGATTAGATTACTGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCt                                                                                             >  1:5299348/1‑100 (MQ=255)  cATGGAACGATTAGATTACTGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCt                                                                                             >  1:5198986/1‑100 (MQ=255)  cATGGAACGATTAGATTACTGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCt                                                                                             >  1:31466/1‑100 (MQ=255)  cATGGAACGATTAGATTACTGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATCAGCTGATAAAGGCTATTTAGACGATGTCGATGGCt                                                                                             >  1:3259200/1‑100 (MQ=255)   ctGGAACGATTAGATTACTGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCtt                                                                                            >  1:5059550/2‑100 (MQ=255)   aTGGAACGATTAGATTACTGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCtt                                                                                            >  1:865277/1‑100 (MQ=255)      ccaCGATTAGATTACTGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAat                                                                                         >  1:52361/3‑100 (MQ=255)              actacattgtcTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTg                                                                                 >  1:4299181/11‑100 (MQ=255)                  taCTGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAAcc                                                                             >  1:4165991/1‑100 (MQ=255)                  caCTGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAAcc                                                                             >  1:3982925/2‑100 (MQ=255)                   aCTGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCa                                                                            >  1:1170607/1‑100 (MQ=255)                     tGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACTAAc                                                                          >  1:2767481/1‑100 (MQ=255)                     tGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAAc                                                                          >  1:2336768/1‑100 (MQ=255)                     tGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGCGCCAAATTATTAGCTGATAACGGCTATTTAGACGGTGTCGATGGCTTAATTATTGCTGAACCAAc                                                                          >  1:4537552/1‑100 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGTTTAATTATTGTTGAACCaata                                                                         >  1:5392283/1‑98 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGaactaact                                                                         >  1:3548339/1‑100 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGTACCAACt                                                                         >  1:4838558/1‑100 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAAccgaat                                                                         >  1:3341902/1‑96 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAAccctgt                                                                         >  1:965268/1‑96 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCacta                                                                         >  1:3289552/1‑97 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCaaat                                                                         >  1:2698271/1‑98 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCATCt                                                                         >  1:4079925/1‑100 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAGCt                                                                         >  1:3029441/1‑100 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCACCt                                                                         >  1:1695740/1‑100 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACt                                                                         >  1:4328053/1‑100 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACt                                                                         >  1:5542438/1‑100 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACt                                                                         <  1:3217865/100‑1 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACt                                                                         >  1:4567590/1‑100 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACt                                                                         >  1:4046010/1‑100 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACt                                                                         >  1:5489454/1‑100 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACt                                                                         >  1:4169568/1‑100 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACt                                                                         >  1:2528980/1‑100 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACt                                                                         >  1:2446649/1‑100 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACAAACt                                                                         >  1:5128578/1‑100 (MQ=255)                      ggCTACTGCTGGCGAAGAGAAAGAACAAGAAGGGGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAAca                                                                         >  1:4719486/1‑99 (MQ=255)                       gCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGaactaacta                                                                        >  1:5031065/1‑99 (MQ=255)                        cTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTACTTAGACGATGTCGATGGCTTAATTATTGCTGAACGAACtag                                                                       >  1:4336593/1‑98 (MQ=255)                         tACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTgag                                                                      >  1:738171/1‑98 (MQ=255)                         gaCTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAAcaaag                                                                      >  1:1719167/2‑96 (MQ=255)                          tctgctgGTGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAAccagat                                                                     >  1:1717069/2‑95 (MQ=255)                          tctgctgGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAATTAGAt                                                                     >  1:3514803/2‑100 (MQ=255)                          aCTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGCTGTCGATGGCTTAATTATTGCTGAACCAACTAGAt                                                                     >  1:5435602/1‑100 (MQ=255)                          aCTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAATCAACTAGAt                                                                     >  1:2348045/1‑100 (MQ=255)                          aCTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCacttagat                                                                     >  1:5583170/1‑93 (MQ=255)                          aCTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAAccagat                                                                     >  1:3153054/1‑95 (MQ=255)                          aCTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAAccagat                                                                     >  1:5793807/1‑95 (MQ=255)                          aCTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAAccagat                                                                     >  1:2585710/1‑95 (MQ=255)                          aCTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTgaga                                                                     >  1:5205588/1‑97 (MQ=255)                          aCTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTAGAt                                                                     >  1:1920069/1‑100 (MQ=255)                          aCTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTAGAt                                                                     >  1:4286658/1‑100 (MQ=255)                          aCTGCTGGCGAAGAGAAAGAACAAGAAGGCGCCATATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAAcaagat                                                                     >  1:3049086/1‑95 (MQ=255)                           gccctgGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAAcggagat                                                                    >  1:2411623/4‑94 (MQ=255)                             gctgGCGAAGAGAAATAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTAGATcgg                                                                  >  1:4498739/1‑98 (MQ=255)                             gctgGCGAAGAGAAAGAACAAGAAGGTGCCGAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCaccagatcgga                                                                  >  1:1841671/1‑90 (MQ=255)                             gctgGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCactagatcgga                                                                  >  1:115194/1‑90 (MQ=255)                             gctgGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAAcatagatcg                                                                  >  1:5323528/1‑92 (MQ=255)                             gctgGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTAGATcgg                                                                  >  1:3594406/1‑98 (MQ=255)                             gctgGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTAGATcgg                                                                  >  1:4230542/1‑98 (MQ=255)                             gctgGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTAGATcgg                                                                  >  1:3804660/1‑98 (MQ=255)                             gctgGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAAACAACTAGATcgg                                                                  >  1:2326281/1‑98 (MQ=255)                             cctgGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTgagatcg                                                                  >  1:4210882/2‑94 (MQ=255)                             actgGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTgagatcg                                                                  >  1:4651794/2‑94 (MQ=255)                              ttgGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTgg                                                                 <  1:2443901/99‑1 (MQ=255)                               tgGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGCTGGCTTAATTATTGCTGAAACAACCAGATcggaa                                                                >  1:2428676/1‑96 (MQ=255)                                ggCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAATCAACTAGATcggaag                                                               >  1:2097601/1‑95 (MQ=255)                                ggCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAAGCAACTAGATcggaag                                                               >  1:3736043/1‑95 (MQ=255)                                ggCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCGCCTAGATcggaag                                                               >  1:2138859/1‑95 (MQ=255)                                ggCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACtaagatcggaa                                                               >  1:2220912/1‑90 (MQ=255)                                ggCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGaa                                                               >  1:5270472/1‑100 (MQ=255)                                gacGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTAGATcggaag                                                               >  1:2580965/3‑95 (MQ=255)                                   taaGGGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAAttt                                                            >  1:1888550/2‑100 (MQ=255)                                             aaCAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGcaca                                                  >  1:3381004/1‑100 (MQ=255)                                                      gTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGtt                                         <  1:1361884/100‑2 (MQ=255)                                                      gTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTc                                         <  1:4676091/100‑1 (MQ=255)                                                       tGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCt                                        <  1:435260/100‑1 (MQ=255)                                                       tGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCt                                        <  1:1802413/100‑1 (MQ=255)                                                        gCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCTa                                       >  1:2567112/1‑100 (MQ=255)                                                               tattaGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCTATGTCATg                                <  1:4919697/100‑1 (MQ=255)                                                                attaGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCTATGTCATGt                               <  1:1479994/100‑1 (MQ=255)                                                                 ttaGCTGATAAAGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCTATGTCATGTa                              <  1:4663999/100‑1 (MQ=255)                                                                           aaGGCTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCTATGTCATGTAAAGTAACTGc                    <  1:2988156/100‑1 (MQ=255)                                                                               cTATTTAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCTATGTCATGTAAAGTAACTGCatca                <  1:4073905/100‑4 (MQ=255)                                                                                  tttAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCTATGTCATGTAAAGTAACTGCAACTggg             <  1:4702329/100‑2 (MQ=255)                                                                                   ttAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCTATGTCATGTAAAGTAACTGCAACtaaag            <  1:1037868/100‑5 (MQ=255)                                                                                   ttAGACGATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCTATGTCATGTAAAGTAACTGCAACTGGTa            <  1:4743162/100‑1 (MQ=255)                                                                                         gATGTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCTATGTCATGTAAAGTAACTGCAACTGGTAAAGCTg      <  1:1288134/100‑1 (MQ=255)                                                                                            gTCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCTATGTCATGTAAAGTAACTGCAACTGGTAAAGCTGTcc   <  1:1035641/100‑1 (MQ=255)                                                                                             tCGATGGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCTATGTCATGTAAAGTAACTGCAACTGGTAAAGCTGTCCa  <  1:3046193/100‑1 (MQ=255)                                                                                                  |                                                                                               TCATGGAACGATTAGATTACTGGCTACTGCTGGCGAAGAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATAGCTTAATTATTGCTGAACCAACTGGATCTGGAATTTATTATGCACATAAGGGGTCTATGTCATGTAAAGTAACTGCAACTGGTAAAGCTGTCCA  >  NC_007793/2131676‑2131867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑