| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,122,247 | A→G | intergenic (‑8/‑43) | SAUSA300_RS10785 ← / → SAUSA300_RS10790 | oxidoreductase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,122,247 | 0 | A | G | 100.0% | 32.5 / NA | 14 | intergenic (‑8/‑43) | SAUSA300_RS10785/SAUSA300_RS10790 | oxidoreductase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (3/11); total (3/11) | |||||||||||
TGATTGCGATTTCTCCATTTTCTTTTTCTTGAATATTGAACATTTCTCCGATGTTCGAATTTGTTTGTAATGCTTGCATATTGTTTATGCTCCTTTCTGCTATACTCCTATTAAGGAGGTGAATGACTTATGACTAATGAAGCTAAATTTGTCCTTTTACAACTTTATTCAATT > NC_007793/2122161‑2122334 | tGATTGCGATTTCTCCATTTTCTTTTTCTTGTATGTTGAACATTTCGCCTATGTTCGATTTTGTTTGTAATGCTTGCATATTGTTTGTGCTCCTTTCTga < 1:1348932/100‑2 (MQ=255) gATTGCGATTTCTCCATTTTCTTTTTCTTGTATGTTGAACATTTCGCCTATGTTCGATTTTGTTTGTAATGCTTGCATATTGTTTGTGCTCCTTTCTGCt < 1:4761257/100‑1 (MQ=255) ttccGATCTCTCCATTTTCTTTTTCTTGTATGTTGAACATTTCGCCTATGTTCGATTTTGTTTGTAATGCTTGCATATTGTTTGTGCTCCTTTCTGCtat < 1:294767/97‑1 (MQ=255) tcCATTTTCTTTTTCTTGTATGTTGAACATTTCGCCTATGTTCGATTTTGTTTGTAATGCTTGCATATTGTTTGTGCTCCTTTCTGCTATACTCCTATTa < 1:1017764/100‑1 (MQ=255) tcCATTTTCTTTTTCTTGTATGTTGAACATTTCGCCTATGTTCGATTTTGTTTGTAATGCTTGCATATTGTTTGTGCTCCTTTCTGCTATACTCCTATTa < 1:114932/100‑1 (MQ=255) tcCATTTTCTTTTTCTTGTATGTTGAACATTTCGCCTATGTTCGATTTTGTTTGTAATGCTTGCATATTGTTTGTGCTCCTTTCTGCTATACTCCTATTa < 1:2430259/100‑1 (MQ=255) tcCATTTTCTTTTTCTTGTATGTTGAACATTTCGCCTATGTTCGATTTTGTTTGTAATGCTTGCATATTGTTTGTGCTCCTTTCTGCTATACTCCTATTa < 1:4318660/100‑1 (MQ=255) aCATTTCGCCTATGTTCGATTTTGTTTGTAATGCTTGCATATTGTTTGTGCTCCTTTCTGCTATACTCCTATTAAGGAGGTGAATGACTTATGACTGAtc < 1:2946425/100‑2 (MQ=255) aCATTTCGCCTATGTTCGATTTTGTTTGTAATGCTTGCATATTGTTTGTGCTCCTTTCTGCTATACTCCTATTAAGGAGGTGAATGACTTATGACTGATg < 1:5578622/100‑1 (MQ=255) gTTCGATTTTGTTTGTAATGCTTGCATATTGTTTGTGCTCCTTTCTGCTATACTCCTATTAAGGAGGTGAATGACTTATGACTGATGAAGCTAAATTTgg < 1:4469518/100‑2 (MQ=255) tttgtAATGCTTGCATATTGTTTGTGCTCCTTTCTGCTATACTCCTATTAAGGAGGTGAATGACTTATGACTGATGAAGCTAAATTTGTCCTTTTACAAc > 1:5188908/1‑100 (MQ=255) gtAATGCTTGCATATTGTTTGTGCTCCTTTCTGCTATACTCCTATTAAGGAGGTGAATGACTTATGACTGATGAAGCTAAATTTGTCCTTTTACAACttt > 1:1399062/1‑100 (MQ=255) tGCTTGCATATTGTTTGTGCTCCTTTCTGCTATACTCCTATTAAGGAGGTGAATGACTTATGACTGATGAAGCTAAATTTGTCCTTTTACAACtttgggg < 1:1977800/100‑5 (MQ=255) tGCATATTGTTTGTGCTCCTTTCTGCTATACTCCTATTAAGGAGGTGAATGACTTATGACTGATGAAGCTAAATTTGTCCTTTTACAACTTTATTCAAtt > 1:3157687/1‑100 (MQ=255) | TGATTGCGATTTCTCCATTTTCTTTTTCTTGAATATTGAACATTTCTCCGATGTTCGAATTTGTTTGTAATGCTTGCATATTGTTTATGCTCCTTTCTGCTATACTCCTATTAAGGAGGTGAATGACTTATGACTAATGAAGCTAAATTTGTCCTTTTACAACTTTATTCAATT > NC_007793/2122161‑2122334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |