| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,119,640 | T→C | intergenic (‑45/+236) | SAUSA300_RS10755 ← / ← SAUSA300_RS10760 | ATPase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,119,640 | 0 | T | C | 100.0% | 10.9 / NA | 6 | intergenic (‑45/+236) | SAUSA300_RS10755/SAUSA300_RS10760 | ATPase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (2/4); total (2/4) | |||||||||||
TTAATTTATTTATTTTCATATCCTTCCTCATGCTCCTTTTTTAATCTTCCGATGACCTCTTAGTACCTCGATAATTAAATTTTTTATTCGTTCATGGCTGTCTGGATTGATTTCATGTATCTGCACAAGCTTATTGTTT > NC_007793/2119577‑2119715 | ttAACTTATTTATTTTCATATCTTTCCTCATGCTCCTTTTTTAATCTTCCGATGACCTCTTAGCACCTCGATAATTAAATTTTTTATTCGTTCATGGCTg < 1:1728571/100‑1 (MQ=255)ttAACTTATTTATTTTCATATCTTTCCTCATGCTCCTTTTTTAATCTTCCGATGACCTCTTAGCACCTCGATAATTAAATTTTTTATTCGTTCATGGCTg < 1:4113752/100‑1 (MQ=255)ttAACTTATTTATTTTCATATCTTTCCTCATGCTCCTTTTTTAATCTTCCGATGACCTCTTAGCACCTCGATAATTAAATTTTTTATTCGTTCATGGCTg < 1:5659911/100‑1 (MQ=255) aacttatttatttTCATATCTTTCCTCATGCTCCTTTTTTAATCTTCCGATGACCTCTTAGCACCTCGATAATTAAATTTTTTATTCGTTCATGGCTGTc > 1:432463/4‑100 (MQ=255) gCTCCTTTTTTAATCTTCCGATGACCTCTTAGCACCTCGATAATTAAATTTTTTATTCGTTCATGGCTGTCTGGCTTGATTTCATGTATCTggtgtgctc > 1:5052249/1‑92 (MQ=255) tttAATCTTCCGATGACCTCTTAGCACCTCGATAATTAAATTTTTTATTCGTTCATGGCTGTCTAGATTGATTTCATGTATCTGCACAAGCTTAttgttt < 1:314249/100‑1 (MQ=255) | TTAATTTATTTATTTTCATATCCTTCCTCATGCTCCTTTTTTAATCTTCCGATGACCTCTTAGTACCTCGATAATTAAATTTTTTATTCGTTCATGGCTGTCTGGATTGATTTCATGTATCTGCACAAGCTTATTGTTT > NC_007793/2119577‑2119715 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |