| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,115,414 | T→C | K40E (AAG→GAG) | SAUSA300_RS10735 ← | replication protein DnaD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,115,414 | 0 | T | C | 100.0% | 30.2 / NA | 13 | K40E (AAG→GAG) | SAUSA300_RS10735 | replication protein DnaD |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (8/5); total (8/5) | |||||||||||
GTCAGACAAGGTCAAAATAGATGTTAATCTTTGTCCTCTTTCAACGGTTACAATTTGGTTTCCTATAGGCACTTTTGCCTTTGAATGATTCGCTTCCATGAGTAAATATATCCATGCTTCAAACTTTGAAAATGTTCTCTTTTCTTTAAATAGCCAATGATTTTGAATTGAGCGATC > NC_007793/2115334‑2115510 | gTCAGACAAGGTCAAAATAGATGTTAATCTTTGTCCTCTTTCAACGGTTACAATTTGGTTTCCTATAGGCACTTTTGCCTCTGAATGATTCGCTTCCATg < 1:1888968/100‑1 (MQ=255) tGTTAATCTTTGTCCTCTTTCAACGGTTACAATTTGGTTTCCTATAGGCACTTTTGCCTCTGAATGATTCGCTTCCATGAGTAAATATATCCATGCTTcg < 1:3562935/100‑2 (MQ=255) ttCAACGGTTACAATTTGGTTTCCTATAGGCACTTTTGCCTCTGAATGATTCGCTTCCATGAGTAAATATATCCATGCTTCGAACTTTGAAAATGTtctc > 1:1141681/1‑100 (MQ=255) tCAACGGTTACAATTTGGTTTCCTATAGGCACTTTTGCCTCTGAATGATTCGCTTCCATGAGTAAATATATCCATGCTTCGAACTTTGAAAATGTtctat < 1:5278563/100‑3 (MQ=255) tGGTTTCCTATAGGCACTTTTGCCTCTGAATGATTCGCTTCCATGAGTAAATATATCCATGCTTCGAACTTTGAAAATGTTCTCTTTTCTTTAAATAGcc > 1:4706888/1‑100 (MQ=255) tttCCTATAGGCACTTTTGCCTCTGAATGATTCGCTTCCATGAGTAAATATATCCATGCTTCGAACTTTGAAAATGTTCTCTTTTCTTTAAATAGCCAAt < 1:3019053/100‑1 (MQ=255) ttCCTATAGGCACTTTTGCCTCTGAATGATTCGCTTCCATGAGTAAATATATCCATGCTTCGAACTTTGAAAATGTTCTCTTTTCTTTAAATAGCCAATg < 1:4368965/100‑1 (MQ=255) ataGGCACTTTTGCCTCTGAATGATTCGCTTCCATGAGTAAATATATCCATGCTTCGAACTTTGAAAATGTTCTCTTTTCTTTAAATAGCCAATGAtttt > 1:4366587/1‑100 (MQ=255) ataGGCACTTTTGCCTCTGAATGATTCGCTTCCATGAGTAAATATATCCATGCTTCGAACTTTGAAAATGTTCTCTTTTCTTTAAATAGCCAATGAtttt > 1:5307713/1‑100 (MQ=255) aGGCACTTTTGCCTCTGAATGATTCGCTTCCATGAGTAAATATATCCATGCTTCGAACTTTGAAAATGTTCTCTTTTCTTTAAATAGCCAATGATTTTGa > 1:902138/1‑100 (MQ=255) ttGCCTCTGAATGATTCGCTTCCATGAGTAAATATATCCATGCTTCGAACTTTGAAAATGTTCTCTTTTCTTTAAATAGCCAATGATTTTGAATTGAGCg > 1:2132744/1‑100 (MQ=255) ccTCTGAATGATTCGCTTCCATGAGTAAATATATCCATGCTTCGAATTTTGAAATTGTTCTCTTTTCTTTAAATAGCCAATGATTTTGAATTGAGCGATc > 1:515227/1‑100 (MQ=255) ccTCTGAATGATTCGCTTCCATGAGTAAATATATCCATGCTTCGAACTTTGAAAATGTTCTCTTTTCTTTAAATAGCCAATGATTTTGAATTGAGCGATc > 1:1185701/1‑100 (MQ=255) | GTCAGACAAGGTCAAAATAGATGTTAATCTTTGTCCTCTTTCAACGGTTACAATTTGGTTTCCTATAGGCACTTTTGCCTTTGAATGATTCGCTTCCATGAGTAAATATATCCATGCTTCAAACTTTGAAAATGTTCTCTTTTCTTTAAATAGCCAATGATTTTGAATTGAGCGATC > NC_007793/2115334‑2115510 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |