| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,114,506 | T→A | R42R (CGA→CGT) | SAUSA300_RS10730 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,114,506 | 0 | T | A | 100.0% | 20.0 / NA | 9 | R42R (CGA→CGT) | SAUSA300_RS10730 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (6/3); total (6/3) | |||||||||||
TGTTTGGTGTCCTAACTCCATTTGTTCATTATCAATAAGTGTTTTTAATTCATAATCATCTAAGTACCAACGTCGACCATTGAATTTTGTGTGTTTTAATCCAACAACTAAATGCCGTCCATCTTTAAAATGTGGTGTAACTGAAAACATTTTGTTGCCGTCATGATC > NC_007793/2114434‑2114601 | tGTTTGGTGTCCTAACTCCATTTGTTCATTATCAATAAGTGTATTTAATTCATAATCGTCTAAATACCAACGACGACCATTAAATTTTGTATGTTTTAAt > 1:641807/1‑100 (MQ=255) aaCTCCATTTGTTCATTATCAATAAGTGTATTTAATTCATAATCGTCTAAATACCAACGACGACCATTAAATTTTGTATGTTTTAATCCAACAACTAAAt > 1:2058701/1‑100 (MQ=255) ccATTTGTTCATTATCAATAAGTGTATTTAATTCATAATCGTCTAAATACCAACGACGACCATTAAATTTTGTATGTTTTAATCCAACAACTAAATGCCg > 1:2124366/1‑100 (MQ=255) ccATTTGTTCATTATCAATAAGTGTATTTAATTCATAATCGTCTAAATACCAACGACGACCATTAAATTTTGTATGTTTTAATCCAACAACTAAATGCCg > 1:276911/1‑100 (MQ=255) ccATTTGTTCATTATCAATAAGTGTATTTAATTCATAATCGTCTAAATACCAACGACGACCATTAAATTTTGTATGTTTTAATCCAACAACTAAATGCCg > 1:894983/1‑100 (MQ=255) aaatACCAACGACGACCATTAAATTTTGTATGTTTTAATCCAACAACTAAATGCCGTCCATCTTTAAAATGTGGTGTAACTGAAAACATTTTGTTGCCGt > 1:5398463/4‑100 (MQ=255) aatACCAACGACGACCATTAAATTTTGTATGTTTTAATCCAACAACTAAATGCCGTCCATCTTTAAAATGTGGTGTAACTGAAAACATTTTGTTGCCGTc < 1:644791/98‑1 (MQ=255) atACCAACGACGACCATTAAATTTTGTATGTTTTAATCCAACAACTAAATGCCGTCCATCTTTAAAATGTGGTGTAACTGAGAACATTTTGTTGCCGTCa < 1:842910/99‑1 (MQ=255) aaCGACGACCACTAAATTTTGTATGTTTTAATCCAACAACTAAATGCCGTCCATCTTTAAAATGTGGTGTAACTGAAAACATTTTGTTGCCGTCATGAtt < 1:1851195/100‑2 (MQ=255) | TGTTTGGTGTCCTAACTCCATTTGTTCATTATCAATAAGTGTTTTTAATTCATAATCATCTAAGTACCAACGTCGACCATTGAATTTTGTGTGTTTTAATCCAACAACTAAATGCCGTCCATCTTTAAAATGTGGTGTAACTGAAAACATTTTGTTGCCGTCATGATC > NC_007793/2114434‑2114601 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |