| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,114,319 | G→A | A29V (GCA→GTA) | SAUSA300_RS10725 ← | Holliday junction DNA helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,114,319 | 0 | G | A | 100.0% | 20.5 / NA | 9 | A29V (GCA→GTA) | SAUSA300_RS10725 | Holliday junction DNA helicase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (5/4); total (5/4) | |||||||||||
TTAATGCATTTTCTAGATTTAGCTTTGGCATTTGATTTTGTAAATATTTTTTATGTTCTGTATATTTTGTAGGCATATATGTGTGTGCATATCTACCTTTTGTGCTAAAACGCGGTCGAGGCGAGCCCATCGGCGCATTAAACACTTCATTAAATTTAATTTCTATCTCC > NC_007793/2114233‑2114402 | ttAATGCATTTTCTAGATTTAGCCTTGGCATTTGACTTTGTAAATATTTTTTATGTTTTGTATAGTTTGTAGGCATGTATGTGTGTACGTATCTGCCttt > 1:3730944/1‑100 (MQ=255)ttAATGCATTTTCTAGATTTAGCCTTGGCATTTGACTTTGTAAATATTTTTTATGTTTTGTATAGTTTGTAGGCATGTATGTGTGTACGTATCTGCCttt > 1:3937658/1‑100 (MQ=255) aTTTTCTATATTTAGCCTTGGCATTTGACTTTGTAAATATTTTTTATGTTTTGTATAGTTTGTAGGCATGTATGTGTGTACGTATCTGCCTTTTGTGCtt < 1:5198868/100‑2 (MQ=255) aTTTTCTAGATTTAGCCTTGGCATTTGACTTTGTAAATATTTTTTATGTTTTGTATAGTTTGTAGGCATGTATGTGTGTACGTATCTGCCTTTTGTGCTa < 1:898349/100‑1 (MQ=255) ttAGCCTTGGCATTTGACTTTGTAAATATTTTTTATGTTTTGTATAGTTTGTAGGCATGTATGTGTGTACGTATCTGCCTTTTGTGCTAAAACGCGGTcc < 1:5330478/100‑2 (MQ=255) ttAGCCTTGGCATTTGACTTTGTAAATATTTTTTATGTTTTGTATAGTTTGTAGGCATGTATGTGTGTACGTATCTGCCTTTTGTGCTAAAACGCGGTCg > 1:5139130/1‑100 (MQ=255) agcctcggCATTTGACTTTGTAAATATTTTTTATGTTTTGTATAGTTTGTAGGCATGTATGTGTGTACGTATCTGCCTTTTGTGCTAAAACGCGGTCGAg > 1:4870618/7‑100 (MQ=255) cATTTGACTTTGTAAATATTTTTTATGTTTTGTATAGTTTGTAGGCATGTATGTGTGTACGTATCTGCCTTTTGTGCTAAAACGCGGTCGAGGCGAcccc < 1:331785/100‑1 (MQ=255) aGGCATGTATGTGTGTACGTATCTGCCTTTTGTGCTAAAACGCGGTCGAGGCGACCCCATCGGCGCATTAAACACTTCATTAAATTTAATTTCTATCTcc > 1:1953703/1‑100 (MQ=255) | TTAATGCATTTTCTAGATTTAGCTTTGGCATTTGATTTTGTAAATATTTTTTATGTTCTGTATATTTTGTAGGCATATATGTGTGTGCATATCTACCTTTTGTGCTAAAACGCGGTCGAGGCGAGCCCATCGGCGCATTAAACACTTCATTAAATTTAATTTCTATCTCC > NC_007793/2114233‑2114402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |