Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,113,970	C→T	R6R (AGG→AGA)	SAUSA300_RS10720 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,113,970	0	C	T	100.0%	21.1 / NA	9	R6R (AGG→AGA)	SAUSA300_RS10720	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (4/5);  total (4/5)

CCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAGATTTGGTAAACCTATATGGTTTATCATTTATTGTTACAATCCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTATGATTATTTTGGGCTCAATTCCATAACGCTTTGAGCTAGTTATTT  >  NC_007793/2113890‑2114064                                                                                 |                                                                                               ccAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCAttt                                                                             >  1:1125436/1‑100 (MQ=255)     cGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATc                                                                         <  1:5185148/100‑1 (MQ=255)        ttATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATCCag                                                                      <  1:5341060/100‑2 (MQ=255)                 gACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATCCACCTCTTatat                                                             >  1:265102/1‑100 (MQ=255)                                ccATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTAt                                              <  1:261346/100‑1 (MQ=255)                                               tgaaCCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTATGATTATTTTGGGCtt                               <  1:3606803/98‑2 (MQ=255)                                                      cccaggTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTATGATTATTTTGGGCTCAATTCCa                        >  1:291529/5‑100 (MQ=255)                                                                       atGTTACAATTCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTATGATTATTTTGGGCTCAATTCCATAACGCTTTGAGCTAGt       >  1:3121193/2‑100 (MQ=255)                                                                            aCAATTCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTATGATTATTTTGGGCTCAATTCCATAACGCTTTGAGCTAGTTagat  <  1:2039063/100‑4 (MQ=255)                                                                                 |                                                                                               CCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAGATTTGGTAAACCTATATGGTTTATCATTTATTGTTACAATCCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTATGATTATTTTGGGCTCAATTCCATAACGCTTTGAGCTAGTTATTT  >  NC_007793/2113890‑2114064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑