Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,113,946	T→A	P14P (CCA→CCT)	SAUSA300_RS10720 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,113,946	0	T	A	100.0%	17.0 / NA	8	P14P (CCA→CCT)	SAUSA300_RS10720	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (4/4);  total (4/4)

CCAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAGATTTGGTAAACCTATATGGTTTATCATTTATTGTTACAATCCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTATGATTATTTTGGGCTC  >  NC_007793/2113859‑2114035                                                                                        |                                                                                          gcAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGttt                                                                               >  1:2263270/2‑100 (MQ=255) ccAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGttt                                                                               >  1:3545569/1‑100 (MQ=255)                                ccAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCAttt                                                >  1:1125436/1‑100 (MQ=255)                                    cGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATc                                            <  1:5185148/100‑1 (MQ=255)                                       ttATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATCCag                                         <  1:5341060/100‑2 (MQ=255)                                                gACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATCCACCTCTTatat                                >  1:265102/1‑100 (MQ=255)                                                               ccATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTAt                 <  1:261346/100‑1 (MQ=255)                                                                              tgaaCCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTATGATTATTTTGGGCtt  <  1:3606803/98‑2 (MQ=255)                                                                                        |                                                                                          CCAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAGATTTGGTAAACCTATATGGTTTATCATTTATTGTTACAATCCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTATGATTATTTTGGGCTC  >  NC_007793/2113859‑2114035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑