Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 2,113,937 A→G F17F (TTT→TTC)  SAUSA300_RS10720 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077932,113,9370AG100.0% 19.4 / NA 9F17F (TTT→TTC) SAUSA300_RS10720hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (4/5);  total (4/5)

GCTTCATGTAGTTCCCAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAGATTTGGTAAACCTATATGGTTTATCATTTATTGTTACAATCCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTAT  >  NC_007793/2113845‑2114020
                                                                                            |                                                                                   
gCTTCATGTAGTTCCCAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCtat                                                                              <  1:5340115/100‑1 (MQ=255)
 cTTCATGTAGTTCCCAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCtata                                                                             <  1:699296/100‑1 (MQ=255)
              gcAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGttt                                                                >  1:2263270/2‑100 (MQ=255)
              ccAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGttt                                                                >  1:3545569/1‑100 (MQ=255)
                                             ccAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCAttt                                 >  1:1125436/1‑100 (MQ=255)
                                                 cGGTTATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATc                             <  1:5185148/100‑1 (MQ=255)
                                                    ttATACCGTGACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATCCag                          <  1:5341060/100‑2 (MQ=255)
                                                             gACTTTCTATTAATTCCATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATCCACCTCTTatat                 >  1:265102/1‑100 (MQ=255)
                                                                            ccATTTCAAATTTACTGAACCTATAAGGTTTATCGTTTATTGTTACAATTCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTAt  <  1:261346/100‑1 (MQ=255)
                                                                                            |                                                                                   
GCTTCATGTAGTTCCCAACCGTCTTTTACTCTCTTAGAAACCATTCCAGCGGTTATACCGTGACTTTCTATTAATTCCATTTCAGATTTGGTAAACCTATATGGTTTATCATTTATTGTTACAATCCTTGCTTTTCTCGCCATTTTATCCACCTCTTATATTTCTTCTATTCGTAT  >  NC_007793/2113845‑2114020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑