Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 2,113,569 G→A S16F (TCT→TTT)  SAUSA300_RS10715 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077932,113,5690GA100.0% 11.4 / NA 6S16F (TCT→TTT) SAUSA300_RS10715hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (2/4);  total (2/4)

AAGTGCCGTTTACTACATGAATATGTGCCACTCGTTCGTTATCCTGATACAGATATCTCTTAGATCCAAAGAATTGATTTAGGTATTCTTTGCGTGCGTTATCTGTCATGATCTACTTCTTAACTTTCACGAATATGTCGTTTTCCATCAGGTAGCA  >  NC_007793/2113507‑2113663
                                                              |                                                                                              
taGTGCCGTTTACTACATGAATATGTGCCACTCGTTCGTTATCCTGATACAGATATCTCTTAAATCCAAAGAATTGATTTAGGTATTCTTTGCGTGCGtt                                                           >  1:2413561/2‑100 (MQ=255)
  gTGCCGTTTACTACATGAATATGTGCCACTCGTTCGTTATCCTGATACAGATATCTCTTAAATCCAAAGAATTGATTTAGGTATTCTTTgcgtgcgtggc                                                         <  1:3810045/100‑4 (MQ=255)
              acATGAATATGTGCCACTCGTTCGTTATCCTGATACAGATATCTCTTAAATCCAAAGAATTGATTTAGGTATTCTTTGCGTGCGTTATCTGTCATGATCt                                             >  1:2401835/1‑100 (MQ=255)
                                          ccTGATACAGATATCTCTTAAATCCAAAGAATTGATTTAGGTATTCTTTGCGTGCGTTATCTGTCATGATCTACTTCTTAACTTTCACGAATATGTCGtg                 <  1:290105/100‑2 (MQ=255)
                                           cTGATACAGATATCTCTTAAATCCAAAGAATTGATTTAGGTATTCTTTGCGTGCGTTATCTGTCATGATCTACTTCTTAACTTTCACGAATATGGAGttt                <  1:574831/100‑1 (MQ=255)
                                                         tctTAAATCCAAAGAATTGATTTAGGTATTCTTTGCGTGCGTTATCTGTCATGATCTACTTCTTAACTTTCACGAATATGTCGTTTTCCAACAGGTAGCa  <  1:4229616/100‑1 (MQ=255)
                                                              |                                                                                              
AAGTGCCGTTTACTACATGAATATGTGCCACTCGTTCGTTATCCTGATACAGATATCTCTTAGATCCAAAGAATTGATTTAGGTATTCTTTGCGTGCGTTATCTGTCATGATCTACTTCTTAACTTTCACGAATATGTCGTTTTCCATCAGGTAGCA  >  NC_007793/2113507‑2113663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑