| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,113,569 | G→A | S16F (TCT→TTT) | SAUSA300_RS10715 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,113,569 | 0 | G | A | 100.0% | 11.4 / NA | 6 | S16F (TCT→TTT) | SAUSA300_RS10715 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (2/4); total (2/4) | |||||||||||
AAGTGCCGTTTACTACATGAATATGTGCCACTCGTTCGTTATCCTGATACAGATATCTCTTAGATCCAAAGAATTGATTTAGGTATTCTTTGCGTGCGTTATCTGTCATGATCTACTTCTTAACTTTCACGAATATGTCGTTTTCCATCAGGTAGCA > NC_007793/2113507‑2113663 | taGTGCCGTTTACTACATGAATATGTGCCACTCGTTCGTTATCCTGATACAGATATCTCTTAAATCCAAAGAATTGATTTAGGTATTCTTTGCGTGCGtt > 1:2413561/2‑100 (MQ=255) gTGCCGTTTACTACATGAATATGTGCCACTCGTTCGTTATCCTGATACAGATATCTCTTAAATCCAAAGAATTGATTTAGGTATTCTTTgcgtgcgtggc < 1:3810045/100‑4 (MQ=255) acATGAATATGTGCCACTCGTTCGTTATCCTGATACAGATATCTCTTAAATCCAAAGAATTGATTTAGGTATTCTTTGCGTGCGTTATCTGTCATGATCt > 1:2401835/1‑100 (MQ=255) ccTGATACAGATATCTCTTAAATCCAAAGAATTGATTTAGGTATTCTTTGCGTGCGTTATCTGTCATGATCTACTTCTTAACTTTCACGAATATGTCGtg < 1:290105/100‑2 (MQ=255) cTGATACAGATATCTCTTAAATCCAAAGAATTGATTTAGGTATTCTTTGCGTGCGTTATCTGTCATGATCTACTTCTTAACTTTCACGAATATGGAGttt < 1:574831/100‑1 (MQ=255) tctTAAATCCAAAGAATTGATTTAGGTATTCTTTGCGTGCGTTATCTGTCATGATCTACTTCTTAACTTTCACGAATATGTCGTTTTCCAACAGGTAGCa < 1:4229616/100‑1 (MQ=255) | AAGTGCCGTTTACTACATGAATATGTGCCACTCGTTCGTTATCCTGATACAGATATCTCTTAGATCCAAAGAATTGATTTAGGTATTCTTTGCGTGCGTTATCTGTCATGATCTACTTCTTAACTTTCACGAATATGTCGTTTTCCATCAGGTAGCA > NC_007793/2113507‑2113663 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |