| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,110,771 | T→C | intergenic (‑7/+21) | SAUSA300_RS10665 ← / ← SAUSA300_RS10670 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,110,771 | 0 | T | C | 100.0% | 34.0 / NA | 14 | intergenic (‑7/+21) | SAUSA300_RS10665/SAUSA300_RS10670 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (2/12); total (2/12) | |||||||||||
TTCTCGCATCTTCAACTCTCTTCGATAGTTATCGATGTGCTGAATGTATTCTTCAAGCTTTTTGATATCGTGTTTCTCAATCTTTATCATTCAATGTAATACCTCCGATAATATAAATTACTTTTTAATATCGTTATTCATTCGCTTTAATTCAATCCTGTATTCTTTTAACCCGTTGTATCCTTTAGTTTTA > NC_007793/2110675‑2110867 | ttCTCGCATCTTCAACTCTCTTCGATAGTTATCGATGTGCTGAATGTATTCTTCAAGCTTTTTGATATCGTGTTTCTCAATCTTTATCATTCAATGCaag < 1:1078141/100‑2 (MQ=255) aTCTTTATGGTTCAATGCAATACCTCCGATAATATAAATTACTTTTTAATATCGTTATTCATTCGCTTTAATTCAATCCTATATTCTTTTAACCCGTTGt < 1:4171256/100‑1 (MQ=255) aTCTTTATGATTCAATGCAATACCTCCGATAATATAAATTACTTTTTAATATCGTTATTCATTCGCTTTAATTCAATCCTGTATTCTTTTAACCCGTTGt < 1:3637040/100‑1 (MQ=255) aTCTTTATCATTCAATGCAATTCCTCCGATAATATAAATTACTTTTTAATATCGTTATTCATTCGCTTTAATTCAATCCTGTATTCTTTTAACCCGTTGt < 1:5433792/100‑1 (MQ=255) aTCTTTATCATTCAATGCAATACCTCCGATAATATAAATTACTTTTTAATATCGTTATTCATTCGCTTTAATTCAATCCTGTATTCTTTTAACCCGTTGt < 1:4440001/100‑1 (MQ=255) aTCTTACTCATTCAATGCAATACCTCCGATAATATAAATTACTTTTTAATATCGTTATTCATTCGCTTTAATTCAATCCTGTATTCTTTTAACCCGTTGt < 1:2653231/100‑1 (MQ=255) cTTTATCATTCAATGCAATACCTCCGATAATATAAATTACTTTTTAATATCGTTATTCATTCGCTTTAATTCAATCCTGTATTCTTTTAACCCGTTGTag < 1:3938755/100‑2 (MQ=255) ttATCATTCAATGCAATACCTCCGATAATATAAATTACTTTTTAATATCGTTATTCATTCGCTTTAATTCAATCCTGTATTCTTTTAACCCGTTGTATcc > 1:1179223/1‑100 (MQ=255) ttATCATTCAATGCAATACCTCCGATAATATAAATTACTTTTTAATATCGTTATTCATTCGCTTTAATTCAATCCTGTATTCTTTTAACCCGTTGTATcc > 1:197150/1‑100 (MQ=255) tCATTCAATGCAATACCTCCGATAATATAAATTACTTTTTAATATCGTTATTCATTCGCTTTAATTCAATCCTGTATTCTTTTAACCCGTTGTacacact < 1:23799/100‑7 (MQ=255) tCATTCAATGCAATACCTCCGATAATATAAATTACTTTTTAATATCGTTATTCATTCGCTTTAATTCAATCCTGTATTCTTTTAACCCGTTGTATCCttt < 1:4767052/100‑1 (MQ=255) tCATTCAATGCAATACCTCCGATAATATAAATTACTTTTTAATATCGTTATTCATTCGCTTTAATTCAATCCTGTATTCTTTTAACCCACTGTATCCttt < 1:5134159/100‑1 (MQ=255) cAATGCAATACCTCCGATAATATAAATTACTTTTTAATATCGTTATTCATTCGCTTTAATTCAATCCTGTATTCTTTTAACCCGTTGTATCCTTTAGttt < 1:5735128/100‑1 (MQ=255) aTGCAATACCTCCGATAATATAAATTACTTTTTAATATCGTTATTCATTCGCTTTAATTCAATCCTGTATTCTTTTAACCCGTTGTATCCTTTAGttttt < 1:5707973/100‑2 (MQ=255) | TTCTCGCATCTTCAACTCTCTTCGATAGTTATCGATGTGCTGAATGTATTCTTCAAGCTTTTTGATATCGTGTTTCTCAATCTTTATCATTCAATGTAATACCTCCGATAATATAAATTACTTTTTAATATCGTTATTCATTCGCTTTAATTCAATCCTGTATTCTTTTAACCCGTTGTATCCTTTAGTTTTA > NC_007793/2110675‑2110867 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |