| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,103,172 | T→A | P33P (CCA→CCT) | SAUSA300_RS10610 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,103,172 | 0 | T | A | 100.0% | 11.0 / NA | 6 | P33P (CCA→CCT) | SAUSA300_RS10610 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (0/6); total (0/6) | |||||||||||
TATCGTCAATAACTATGAAAGGTACATCCGTATCTTTTACGTTTGGGTATTTATTGAACTTAATATTATTGATATTTACGTGCTCTCTAATAATTCTGTCTTGACTAATCACTTCATGAACTTTGTACAAAATATCA > NC_007793/2103129‑2103265 | tatCGTCAATAACAATAAAAGGTACATCAGTATCTTTTACATTAGGGTATTTATTGAACTTAATATTATTGATATTTACGTGCTCTCTAATAATTCTGtt < 1:4376079/100‑2 (MQ=255) tCGTCAATAACAATAAAAGGTACATCAGTATCTTTTACATTAGGGTATTTATTGAACTTAATATTATTGATATTTACGTGCTCTCTAATAATTCTGTCtt < 1:2743491/100‑1 (MQ=255) tCGTCAATAACAATAAAAGGTACATCAGTATCTTTTACATTAGGGTATTTATTGAACTTAATATTATTGATATTTACGTGCTCTCTAATAATTCTGTCtt < 1:5085242/100‑1 (MQ=255) cGTCAATAACAATAAAAGGTACATCAGTACCTTTTACATTAGGGTATTTATTGAACTTAATATTATTGATATTTACGTGCTCTCTAATAATTCTGTCTTg < 1:3723089/100‑1 (MQ=255) ataaaaGGTACATCAGTATCTTTTACATTAGGGTATTTATTGAACTTAATATTATTGATATTTACGTGCTCTCTAATAATTCTGTCTTGACTAATCACtt < 1:1790296/97‑1 (MQ=255) tACATTAGGGTATTTATTGAACTTAATATTATTGATATTTACGTGCTCTCTAATAATTCTGTCTTGACTAATCACTTCATGAACTTTGTACAAGATatcg < 1:4921241/100‑2 (MQ=255) | TATCGTCAATAACTATGAAAGGTACATCCGTATCTTTTACGTTTGGGTATTTATTGAACTTAATATTATTGATATTTACGTGCTCTCTAATAATTCTGTCTTGACTAATCACTTCATGAACTTTGTACAAAATATCA > NC_007793/2103129‑2103265 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |