Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,102,764	G→A	S33S (AGC→AGT)	SAUSA300_RS10605 ←	phage tail protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,102,764	0	G	A	100.0%	26.3 / NA	11	S33S (AGC→AGT)	SAUSA300_RS10605	phage tail protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (4/7);  total (4/7)

TTCGATTGGACCACCATCAGCATATGCTGTTTTCAAGTCTCCTCCAGTTTCAACACCGATTTTTTGTAATCCTCTAGTTTTTGTAATATCGCTATATTCTAGCTTTGCGCCTTCTTTTGTTAATTTAGCGAAACCTAAACCAGTAATGTTAAAATACGCTTTCGGCGCACTTGCTTG  >  NC_007793/2102674‑2102850                                                                                           |                                                                                       tacgcctGGACCGCCATCAGCATAAGCTGTTTTTAGTTCTCCACCAGTTTCAACACCAATTTTTTGTAATCCTCTTGTTTTTGTAATATCACTATAtttt                                                                               >  1:2913169/7‑98 (MQ=255)         caccgccATCAGCATAAGCTGTTTTTAGTTCTCCACCAGTTTCAACACCAATTTTTTGTAATCCTCTTGTTTTTGTAATATCACTATATTTTaattccgc                                                                       >  1:4605520/2‑93 (MQ=255)                  cAGCATAAGCTGTTTTTAGTTCTCCACCAGTTTCAACACCAATTTTTTGTAATCCTCTTGTTTTTGTAATATCACTATATTTTAATTCCGCGCcttcttg                                                              <  1:3157439/100‑2 (MQ=255)                           cTGTTTTTAGTTCTCCACCAGTTTCAACACCAATTTTTTGTAATCCTCTTGTTTTTGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAAttt                                                     <  1:381980/100‑1 (MQ=255)                                         ccaccAGTTTCAACACC‑AATTTTTGTAATCCTCTTGTTTTTGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAATTTAGCGAAACCTAAAcc                                      >  1:1066555/4‑100 (MQ=255)                                                   cAACACCAATTTTTTGTAATCCTCTTGTTTTTGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAATTTAGCGAAACCTAAACCAGTAATGtt                             <  1:995073/100‑1 (MQ=255)                                                                     aTCCTCTTGTTTTTGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAATTTAGCGAAACCTAAACCAGTAATGTTAATATACGCCTTTggggt           <  1:3814337/100‑4 (MQ=255)                                                                             gTTTTTGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAATTTAGCGAAACCTAAACCAGTAATGTTAATATACGCCTTTGGCGCActtgcat   <  1:177684/100‑3 (MQ=255)                                                                             gTTTTTGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAATTTAGCGAAACCTAAACCAGTAATGTTAATATACGCCTTTGGCGCActtgcat   <  1:1919053/100‑3 (MQ=255)                                                                             gTTTTTGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAATTTAGCGAAACCTAAACCAGTAATGTTAATATACGCCTTTGGCGCActtgcat   >  1:2659914/1‑98 (MQ=255)                                                                              tttttGTAATATCACTATATTTTAATTCCGCGCCTTCTTTCGTTAATTTAGCGAAACCTAAACCAGTAATGTTAATATACGCCTTTGGCGCActtgcatt  <  1:152576/100‑4 (MQ=255)                                                                                           |                                                                                       TTCGATTGGACCACCATCAGCATATGCTGTTTTCAAGTCTCCTCCAGTTTCAACACCGATTTTTTGTAATCCTCTAGTTTTTGTAATATCGCTATATTCTAGCTTTGCGCCTTCTTTTGTTAATTTAGCGAAACCTAAACCAGTAATGTTAAAATACGCTTTCGGCGCACTTGCTTG  >  NC_007793/2102674‑2102850

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑