Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,102,587	C→A	E92D (GAG→GAT)	SAUSA300_RS10605 ←	phage tail protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,102,587	0	C	A	100.0%	25.1 / NA	11	E92D (GAG→GAT)	SAUSA300_RS10605	phage tail protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (0/11);  total (0/11)

GTGCCGTCTCGACGCTCTTGTCTGAACCAAATTGCTACATAGTTGTTTTGTTTACCTTGAGTTTCTTTATAAACACCGTATTCATCATACTCTTCATTGAATACTATTTTGCGAATCTCTTTAGGGAAAGCATGCATTTGTAACGAAATTTTACCTTCTCCGTCTGTGTTCCCTGATTCGATTGG  >  NC_007793/2102498‑2102682                                                                                          |                                                                                                gtaccGTCTCTACGCTCTTGTCTGAACCATACAGCTACGTAATTGTTTTGTTTACCTTGTTTCTCTTCGTAAACGCCATCTTCATCATAATCTTCAttat                                                                                       <  1:3806091/97‑3 (MQ=255)                           ccatacagCTACGTAATTGTTTTGTTTACCTTGTTTCTCTTCGTAAACGCCATCTTCATCATAATCTTCATTAAAAACAATTTTGCGAATCTCTTTAggg                                                             <  1:2070599/93‑1 (MQ=255)                                                                    cgtaAACGCCATCTTCATCATAATCTTCATTAAAAACAATTTTGCGAATCTCTTTAGGGAACGCATGCATTTGTAATGAGATTTTACCTTCTCCGTCtgt                    <  1:2996373/98‑1 (MQ=255)                                                                    cgtaAACGCCATCTTCATCATAATCTTCATTAAAAACAATTTTGCGAATCTCTTTAGGGAACGCATGCATTTGTAATGAGATTTTACCTTCTCCGTCtgt                    <  1:3866519/98‑1 (MQ=255)                                                                      taAACGCCATCTTCATCATAATCTTCATTAAAAACAATTTTGCGAATCTCTTTAGGGAACGCATGCATTTGTAATGAGATTTTACCTTCTCCGTCtgtat                  <  1:1247571/100‑3 (MQ=255)                                                                            ccatcttCATCATAATCTTCATTAAAAACAATTTTGCGAATCTCTTTAGGGAACGCATGCATTTGTAATGAGATTTTACCTTCTCCGTCTGTATTCCCTg            <  1:5138992/95‑1 (MQ=255)                                                                            ccatcttCATCATAATCTTCATTAAAAACAATTTTGCGAATCTCTTTAGGGAACGCATGCATTTGTAATGAGATTTTACCTTCTCCGTCTGTATTCCCTg            <  1:988841/95‑1 (MQ=255)                                                                              atcttCATCATAATCTTCATTAAAAACAATTTTGCGAATCTCTTTAGTGAACGCTTGCATTTGTAATGAGATTTTACCTTCTCCGTCTGTATTCCCTGAt          <  1:5592636/97‑1 (MQ=255)                                                                              atcttCATCATAATCTTCATTAAAAACAATTTTGCGAATCTCTTTAGGGAACGCATGCATTTGTAATGAGATTTTACCTTCTCCGTCTGTATTCCCTGAt          <  1:91555/97‑1 (MQ=255)                                                                                      catAATCTTCATTAAAAACAATTTTGCGAATCTCTTTAGGGAACGCATGCATTTGTAATGAGATTTTACCTTCTCCGTCTGTATTCCCTGATTCAATTgg  <  1:4745060/100‑1 (MQ=255)                                                                                      catAATCTTCATTAAAAACAATTTTGCGAATCTCTTTAGGGAACGCATGCATTTGTAATGAGATTTTACCTTCTCCGTCTGTATTCCCTGATTCAATTgg  <  1:787360/100‑1 (MQ=255)                                                                                          |                                                                                                GTGCCGTCTCGACGCTCTTGTCTGAACCAAATTGCTACATAGTTGTTTTGTTTACCTTGAGTTTCTTTATAAACACCGTATTCATCATACTCTTCATTGAATACTATTTTGCGAATCTCTTTAGGGAAAGCATGCATTTGTAACGAAATTTTACCTTCTCCGTCTGTGTTCCCTGATTCGATTGG  >  NC_007793/2102498‑2102682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑