Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,102,508	G→T	R119R (CGA→AGA)	SAUSA300_RS10605 ←	phage tail protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,102,508	0	G	T	100.0%	42.6 / NA	16	R119R (CGA→AGA)	SAUSA300_RS10605	phage tail protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (4/12);  total (4/12)

AATCCCAATCTTTCTCAGCCGTTTCGCCATCGATTTTAGGATTTGTAAACATGACTTTAGGTAATAAAACCGTTCTAAATGTGCCGTCTCGACGCTCTTGTCTGAACCAAATTGCTACATAGTTGTTTTGTTTACCTTGAGTTTCTTTATAAACACCGTATTCATCATACTCTTCATTGA  >  NC_007793/2102418‑2102597                                                                                           |                                                                                          taTCCCAATCTTTCTCAGCCGTTTCTCCATCGATTTTAGGATTTGTAAACATAACTTTAGGTAATAAAACTGTTCTAAATGTACCGTCTCTACGCTCTTg                                                                                  >  1:1117736/2‑100 (MQ=255)    tccgaTCTTTCTCGGCCGTTTCTCCATCGATTTTAGGATTTGTAAACATAACTTTAGGTAATAAAACTGTTCTAAATGTACCGTCTCTACGCTCTTGTCt                                                                               <  1:1889855/96‑1 (MQ=255)    ctcttccgatctcAGCCGTTTCTCCATCGATTTTAGGATTTGTAAACATAACTTTAGGTAATAAAACTGTTCTAAATGTACCGTCTCTACGCTCTTGTCt                                                                               <  1:5039288/91‑1 (MQ=255)    cccAATCTTTCTCAGCCGTTTCTCCATCGATTTTAGGATTTGTAAACATAACTTTAGGTAATAAAACTGTTCTAAATGTACCGTCTCTACGCTCTTGTCt                                                                               <  1:3845599/100‑1 (MQ=255)      cAATCTTTCTCAGCCGTTTCTCCATCGATTTTAGGATTTGTAAACATAACTTTAGGTAATAAAACTGTTCTAAATGTGCCGTCTCTACGCTCTTGTCTGa                                                                             <  1:875877/100‑1 (MQ=255)      cAATCTTTCTCAGCCGTTTCTCCATCGATTTTAGGATTTGTAAACATAACTTTAGGTAATAAAACTGTTCTAAATGTACCGTCTCTACGCTCTTGTCTGa                                                                             <  1:5321954/100‑1 (MQ=255)       gaTCTTTCTCAGCCGTTTCTCCATCGATTTTAGGATTTGTAAACATAACTTTAGGTAATAAAACTGTTCTAAATGTACCGTCTCTACGCTCTTgctgtca                                                                            <  1:5379014/99‑7 (MQ=255)         tCTTTCTCAGCCGTTTCTCCATCGATTTTAGGATTTGTAAACATAACTTTAGGTAATAAAACTGTTCTAAATGTACCGTCTCTACGCTCTTGTCTGAAcc                                                                          <  1:1685116/100‑1 (MQ=255)          cTTTCTCAGCCGTTTCTCCATCGATTTTAGGATTTGTAAACATAACTTTAGGTAATAAAACTGTTCTAAATGTACCGTCTCTACGCTCTTGTCTGAACCa                                                                         <  1:3643284/100‑1 (MQ=255)           tttCTCAGCCGTTTCTCCATCGATTTTAGGATTTGTAAACATAACTTTAGGTAATAAAACTGTTCTAAATGTACCGTCTCTACGCTCTTGTCTGAACCat                                                                        <  1:3482160/100‑2 (MQ=255)            ttCTCAGCCGTTTCTCCATCGATTTTAGGATTTGTAAACATAACTTTAGGTAATAAAACTGTTCTAAATGTACCGTCTCTACGCTCTTGTCTGAACCata                                                                       >  1:1958572/1‑98 (MQ=255)               acAGCCGTTTCTCCATCGATTTTAGGATTTGTAAACATAACTTTAGGTAATAAAACTGTTCTAAATGTACCGTCTCTACGCTCTTGTCTGAACCatacag                                                                    >  1:5713592/2‑95 (MQ=255)                  gCCGTTTCTCCATCGATTTTAGGATTTGTAAACATAACTTTAGGTAATAAAACTGTTCTAAATGTACCGTCTCTACGCTCTTGTCTGAACCatacaggag                                                                 <  1:3144461/100‑9 (MQ=255)                     gTTTCTCCATCGATTTTAGGATTTGTAAACATAACTTTAGGTAATAAAACTGTTCTAAATGTACCGTCTCTACGCTCTTGTCTGAACCATACAGCTAcgt                                                              <  1:3318101/100‑3 (MQ=255)                        ttcccATCGATTTTAGGATTTGTAAACATAACTTTAGGTAATAAAACTGTTCTAAATGTACCGTCTCTACGCTCTTGTATGAACCATACAGCTACGTaat                                                           >  1:3937633/4‑98 (MQ=255)                                                                                 gtaccGTCTCTACGCTCTTGTCTGAACCATACAGCTACGTAATTGTTTTGTTTACCTTGTTTCTCTTCGTAAACGCCATCTTCATCATAATCTTCAttat  <  1:3806091/97‑3 (MQ=255)                                                                                           |                                                                                          AATCCCAATCTTTCTCAGCCGTTTCGCCATCGATTTTAGGATTTGTAAACATGACTTTAGGTAATAAAACCGTTCTAAATGTGCCGTCTCGACGCTCTTGTCTGAACCAAATTGCTACATAGTTGTTTTGTTTACCTTGAGTTTCTTTATAAACACCGTATTCATCATACTCTTCATTGA  >  NC_007793/2102418‑2102597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑