Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,102,332	T→A	A177A (GCA→GCT)	SAUSA300_RS10605 ←	phage tail protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,102,332	0	T	A	100.0%	21.0 / NA	9	A177A (GCA→GCT)	SAUSA300_RS10605	phage tail protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (0/9);  total (0/9)

CTGTCACGTTTCCAGTATATTCTTCGCCTAAAATTTTCTTTAAGAAAGCCTCTTCGCCTTTTTCACCATTTCCACTATGATTTGTCATGTTTGCTGAATCAAAGATATATTTACGTACTGACTTTTTATTATCAATTAAAGGGAAAAGTGCCTCACCTTCAACCTCTTCGCTTG  >  NC_007793/2102241‑2102414                                                                                            |                                                                                   ctGTCACGTTTCCAGTATATTCTTCGCCTAAAATTTTCTTTAAGAAAGCCTCTTCGCCTTTTTCACCGTCGCCACCATGATTTATCATGTTAGCTGagaa                                                                            <  1:5554798/100‑4 (MQ=255)   gTCACGTTTCCAGTATATTCTTCGCCTAAAATTTTCTTTAAGAAAGCCTCTTCGCCTTTTTCACCGTCGCCACCATGATTTGTCATGTTAGCTGAGTCaa                                                                          <  1:4899966/100‑1 (MQ=255)                 atatTCTTCGCCTAAAATTTTCTTTAAGAAAGCCTCTTCGCCTTTTTCACCGTCGCCACCATGATTTGTCATGTTAGCTGAGTCAAAGATATATTTACGt                                                            <  1:3349678/100‑1 (MQ=255)                   atTCTTCGCCTAAAATTTTCTTTAAGAAAGCCTCTTCGCCTTTTTCACCGTCGCCACCATGATTTGTCATGTTAGCTGAGTCAAAGATATATTTACGTAc                                                          <  1:3342447/100‑1 (MQ=255)                                        ttAAGAAAGCCTCTTCGCCTTTTTCACCGTCGCCACCATGATTTGTCATGTTAGCTGAGTCAAAGATATATTTACGTACAGACTTTTTATTATCAACTaa                                     <  1:5032831/100‑1 (MQ=255)                                                        gCCTTTTTCACCGTCGCCACCATGATTTGTCATGTTAGCTGAGTCAAAGATATATTTACGTACAGACTTTTTATTATCAACTAAAGGGAAAAGTggcacg                     <  1:1559580/100‑6 (MQ=255)                                                            atttCACCGTCGCCACCATGATTTGTCATGTTAGCTGAGTCAAAGATATATTTACGTACAGACTTTTTATTATCAACTAAAGGGAAAAGTGCCTCACCtt                 <  1:4592519/99‑1 (MQ=255)                                                                           ccaTGATTTGTCATGTTAGCTGAGTCAAAGATATATTTACGTACAGACTTTTTATTATCAACTAAAGGGAAAAGTGCCTCACCTTCAACCTCTTCACTTg  <  1:1938979/98‑1 (MQ=255)                                                                           ccaTGATTTGTCATGTTAGCTGAGTCAAAGATATATTTACGTACAGACTTTTTATTATCAACTAAAGGGAAAAGTGCCTCACCTTCAACCTCTTCACTTg  <  1:5241655/98‑1 (MQ=255)                                                                                            |                                                                                   CTGTCACGTTTCCAGTATATTCTTCGCCTAAAATTTTCTTTAAGAAAGCCTCTTCGCCTTTTTCACCATTTCCACTATGATTTGTCATGTTTGCTGAATCAAAGATATATTTACGTACTGACTTTTTATTATCAATTAAAGGGAAAAGTGCCTCACCTTCAACCTCTTCGCTTG  >  NC_007793/2102241‑2102414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑