Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,102,135	A→G	intergenic (‑233/+83)	SAUSA300_RS10600 ← / ← SAUSA300_RS10605	hypothetical protein/phage tail protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,102,135	0	A	G	100.0%	13.1 / NA	7	intergenic (‑233/+83)	SAUSA300_RS10600/SAUSA300_RS10605	hypothetical protein/phage tail protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (1/6);  total (1/6)

ACTATTGATTGATACAATATTCGTTTGATCTGTTGTGTATTTCAATAACTTACTTTGATTAGATGGCTCTACTACAACATTTAAATCATATGTGTTGCCAACTTTTAGTGTTTTAAAACTATCTGGTATATTAACCGACTTTATCTCAGT  >  NC_007793/2102048‑2102197                                                                                        |                                                               tcTATTGATTGATACAATATTCGTTTGATCTGTTGTGTATTTCAATAACTTACTTTGATTAGATGGCTCTACTACAACATTTAAATCGTATGTGTCGCCa                                                    <  1:2389347/99‑1 (MQ=255)                              cTGTTGTGTATTTCAATAACTTACTTTGATTAGATGGCTCTACTACAACATTTAAATCGTATGTGTCGCCAACTTTAAGTGTTTTAATGCTATCTGGtat                       <  1:4611557/100‑1 (MQ=255)                              cTGTTGTGTATTTCAATAACTTACTTTGATTAGATGGCTCTACTACAACATTTAAATCGTATGTGTCGCCAACTTTAAGTGTTTTAATGCTATCTGGtat                       <  1:4946231/100‑1 (MQ=255)                                gttgtGTATTTCAATAACTTACTTTGATTAGATGGCTCTACTACAACATTTAAATCGTATGTGTCGCCAACTTTAAGTGTTTTAATGCTATCTGGTatat                     >  1:3739369/1‑100 (MQ=255)                                                acttacttTGATTAGATGGCTCTACTACAACATTTAAATCGTATGTGTCGCCAACTTTAAGTGTTTTAATGCTATCTGGTATATTAACCGACTTTaccgc     <  1:5370268/100‑5 (MQ=255)                                                acttacttTGATTAGATGGCTCTACTACAACATTTAAATCGTATGTGTCGCCAACTTTAAGTGTTTCAATGCTATCTGGTATATTAACCGACTTTaccgc     <  1:2717326/100‑5 (MQ=255)                                                   tacttTGATTAGATGGCTCTACTACAACATTTAAATCGTATGTGTCGCCAACTTTAAGTGTTTTAATGCTATCTGGTATATTAACCGACTTTACCGCAga  <  1:1400040/100‑2 (MQ=255)                                                                                        |                                                               ACTATTGATTGATACAATATTCGTTTGATCTGTTGTGTATTTCAATAACTTACTTTGATTAGATGGCTCTACTACAACATTTAAATCATATGTGTTGCCAACTTTTAGTGTTTTAAAACTATCTGGTATATTAACCGACTTTATCTCAGT  >  NC_007793/2102048‑2102197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑