| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,101,594 | T→C | Q103Q (CAA→CAG) | SAUSA300_RS10600 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,101,594 | 0 | T | C | 100.0% | 11.6 / NA | 6 | Q103Q (CAA→CAG) | SAUSA300_RS10600 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (1/5); total (1/5) | |||||||||||
TTTATTTCATGTTCTGGATAAAATTTCTAGTTTCCTCAGTTTGTTGACCTTGCGTAATGAAAACCACTTGTTCACGAAGTGCATTCATTCCATCAGGTGCATGCATACGTTCTTTTAGGTCTTTAACTGCG > NC_007793/2101551‑2101681 | tttATTTCATGTTCTGGATAAAATTTCTAGTTTCCTCAGTTTGCTGACCTTGAGTAATGAAAATTACTTGTTCACGAAGTGCATTCATTCCATCAGGtgc < 1:548800/100‑1 (MQ=255) ttATTTCATGTTCTGGATAAAATTTCTAGTTTCCTCAGTTTGCTGACCTTGAGTAATGAAAATTACTTGTTCACGAAGTGCATTCATTCCATCAGGtgct < 1:4706451/100‑2 (MQ=255) tATTTCATGTTCTGGATAAAATTTCTAGTTTCCTCAGTTTGCTGACCTTGAGTAATGAAAATTACTTGTTCACGAAGTGCATTCATTCCATCAGGtgcat < 1:473056/100‑1 (MQ=255) aTGTTCTGGATAAAATTTCTAGTTTCCTCAGTTTGCTGACCTTGAGTAATGAAAATTACTTGTTCACGAAGTGCATTCATTCCATCAGGTGCATGCATag < 1:3473876/100‑2 (MQ=255) tAAAATTTCTAGTTTCCTCAGTTTGCTGACCTTGAGTAATGAAAATTACTTGTTCACGAAGTGCATTCATTCCATCAGGTGCGTGCATACGTTCTTTTaa > 1:1613782/1‑99 (MQ=255) ttCCTCAGTTTGCTGACCTTGAGTAATGAAAATTACTTGTTCACGAAGTGCATTCATTCCATCAGGTGCATGCATACGTTCTTTTAAGTCTTTAACTgtg < 1:1407585/100‑3 (MQ=255) | TTTATTTCATGTTCTGGATAAAATTTCTAGTTTCCTCAGTTTGTTGACCTTGCGTAATGAAAACCACTTGTTCACGAAGTGCATTCATTCCATCAGGTGCATGCATACGTTCTTTTAGGTCTTTAACTGCG > NC_007793/2101551‑2101681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |